RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 CSTF3Q12996 717 aaKnown RBP15.37■□□□□ 0.05
CPSF1-207ENST00000531727 RASA2Q15283 850 aa15.37■□□□□ 0.05
CPSF1-207ENST00000531727 SF3B4Q15427 424 aaKnown RBP eCLIP15.37■□□□□ 0.051e-8■■■■□ 20
CPSF1-207ENST00000531727 UNC50Q53HI1 259 aa15.37■□□□□ 0.05
CPSF1-207ENST00000531727 TCHHL1Q5QJ38 904 aaPredicted RBP15.37■□□□□ 0.05
CPSF1-207ENST00000531727 ZNF678Q5SXM1 525 aa15.37■□□□□ 0.05
CPSF1-207ENST00000531727 SLC30A6Q6NXT4 461 aa15.37■□□□□ 0.05
CPSF1-207ENST00000531727 TIFABQ6ZNK6 161 aa15.37■□□□□ 0.05
CPSF1-207ENST00000531727 NUP54Q7Z3B4 507 aa15.37■□□□□ 0.05
CPSF1-207ENST00000531727 CTAGE4Q8IX94 777 aa15.37■□□□□ 0.05
CPSF1-207ENST00000531727 CDYL2Q8N8U2 506 aa15.37■□□□□ 0.05
CPSF1-207ENST00000531727 SIMC1Q8NDZ2 872 aa15.37■□□□□ 0.05
CPSF1-207ENST00000531727 OR1J4Q8NGS1 313 aa15.37■□□□□ 0.05
CPSF1-207ENST00000531727 HGDQ93099 445 aa15.37■□□□□ 0.05
CPSF1-207ENST00000531727 MTBPQ96DY7 904 aa15.37■□□□□ 0.05
CPSF1-207ENST00000531727 CNRIP1Q96F85 164 aaPredicted RBP15.37■□□□□ 0.05
CPSF1-207ENST00000531727 ZNF382Q96SR6 550 aa15.37■□□□□ 0.05
CPSF1-207ENST00000531727 UGT2B28Q9BY64 529 aa15.37■□□□□ 0.05
CPSF1-207ENST00000531727 TMEM216Q9P0N5 145 aa15.37■□□□□ 0.05
CPSF1-207ENST00000531727 PRODH2Q9UF12 536 aa15.37■□□□□ 0.05
CPSF1-207ENST00000531727 CAMK2AQ9UQM7 478 aa15.37■□□□□ 0.05
CPSF1-207ENST00000531727 PLLPQ9Y342 182 aa15.37■□□□□ 0.05
CPSF1-207ENST00000531727 ZNF780BQ9Y6R6 833 aa15.37■□□□□ 0.05
CPSF1-207ENST00000531727 F8P00451 2351 aa15.37■□□□□ 0.05
CPSF1-207ENST00000531727 CCDC168Q8NDH2 2452 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 GNB5O14775 395 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 CTAG2O75638 210 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 SUPT7LO94864 414 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 IL2RAP01589 272 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 ABHD2P08910 425 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 RHOXF2BP0C7M4 288 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 PCSK2P16519 638 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 BMP7P18075 431 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 DRD5P21918 477 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 GCAP28676 217 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 DNAJA1P31689 397 aaKnown RBP15.36■□□□□ 0.05
CPSF1-207ENST00000531727 UQCRC1P31930 480 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 KIR2DL3P43628 341 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 PPICP45877 212 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 EMDP50402 254 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 DCAF7P61962 342 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 SNTA1Q13424 505 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 LTB4RQ15722 352 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 FBXL19-AS1Q494R0 122 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 TRMT12Q53H54 448 aaKnown RBP15.36■□□□□ 0.05
CPSF1-207ENST00000531727 EIPR1Q53HC9 387 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 WIPI1Q5MNZ9 446 aaPredicted RBP15.36■□□□□ 0.05
CPSF1-207ENST00000531727 NSUN5P2Q63ZY6 315 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 DESI1Q6ICB0 168 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 FAM180BQ6P0A1 224 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 POMZP3Q6PJE2 187 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 ANGPTL8Q6UXH0 198 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 GPRIN3Q6ZVF9 776 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 LCA5Q86VQ0 697 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 FAM83FQ8NEG4 500 aaPredicted RBP15.36■□□□□ 0.05
CPSF1-207ENST00000531727 OR52R1Q8NGF1 315 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 LRRC46Q96FV0 321 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 WDYHV1Q96HA8 205 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 TMEM237Q96Q45 408 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 NODALQ96S42 347 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 SH3GL2Q99962 352 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 OSBPL11Q9BXB4 747 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 DNAJB12Q9NXW2 375 aaKnown RBP15.36■□□□□ 0.05
CPSF1-207ENST00000531727 HEY2Q9UBP5 337 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 ZNF629Q9UEG4 869 aaPredicted RBP15.36■□□□□ 0.05
CPSF1-207ENST00000531727 FETUBQ9UGM5 382 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 MCM8Q9UJA3 840 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 UTS2RQ9UKP6 389 aa15.36■□□□□ 0.05
CPSF1-207ENST00000531727 CD8B2A6NJW9 211 aa15.35■□□□□ 0.05
CPSF1-207ENST00000531727 SNPHO15079 494 aa15.35■□□□□ 0.05
CPSF1-207ENST00000531727 TO15178 435 aa15.35■□□□□ 0.05
CPSF1-207ENST00000531727 DLX3O60479 287 aa15.35■□□□□ 0.05
CPSF1-207ENST00000531727 ICOSLGO75144 302 aa15.35■□□□□ 0.05
CPSF1-207ENST00000531727 ESRRBO95718 433 aa15.35■□□□□ 0.05
CPSF1-207ENST00000531727 CD1EP15812 388 aa15.35■□□□□ 0.05
CPSF1-207ENST00000531727 CHN1P15882 459 aa15.35■□□□□ 0.05
CPSF1-207ENST00000531727 PTGDSP41222 190 aa15.35■□□□□ 0.05
CPSF1-207ENST00000531727 MRPS35P82673 323 aaKnown RBP15.35■□□□□ 0.05
CPSF1-207ENST00000531727 SNTB1Q13884 538 aaKnown RBP15.35■□□□□ 0.05
CPSF1-207ENST00000531727 DCST1Q5T197 706 aa15.35■□□□□ 0.05
CPSF1-207ENST00000531727 ZZZ3Q8IYH5 903 aa15.35■□□□□ 0.05
CPSF1-207ENST00000531727 ZNF675Q8TD23 568 aa15.35■□□□□ 0.05
CPSF1-207ENST00000531727 NRGNQ92686 78 aa15.35■□□□□ 0.05
CPSF1-207ENST00000531727 RNASE6Q93091 150 aaKnown RBP15.35■□□□□ 0.05
CPSF1-207ENST00000531727 ABTB1Q969K4 478 aaPredicted RBP15.35■□□□□ 0.05
CPSF1-207ENST00000531727 GALNT9Q9HCQ5 603 aa15.35■□□□□ 0.05
CPSF1-207ENST00000531727 KIAA1549Q9HCM3 1950 aa15.35■□□□□ 0.05
CPSF1-207ENST00000531727 C2orf72A6NCS6 295 aa15.34■□□□□ 0.05
CPSF1-207ENST00000531727 MBD3L4A6NDZ8 208 aaPredicted RBP15.34■□□□□ 0.05
CPSF1-207ENST00000531727 MBD3L3A6NE82 208 aaPredicted RBP15.34■□□□□ 0.05
CPSF1-207ENST00000531727 FRG2CA6NGY1 282 aa15.34■□□□□ 0.05
CPSF1-207ENST00000531727 MBD3L5A6NJ08 208 aaPredicted RBP15.34■□□□□ 0.05
CPSF1-207ENST00000531727 PCDH7O60245 1069 aa15.34■□□□□ 0.05
CPSF1-207ENST00000531727 UGT2B11O75310 529 aa15.34■□□□□ 0.05
CPSF1-207ENST00000531727 ULK1O75385 1050 aa15.34■□□□□ 0.05
CPSF1-207ENST00000531727 BCAS2O75934 225 aaPredicted RBP15.34■□□□□ 0.05
CPSF1-207ENST00000531727 ACTL6AO96019 429 aa15.34■□□□□ 0.05
CPSF1-207ENST00000531727 IL3P08700 152 aa15.34■□□□□ 0.05
CPSF1-207ENST00000531727 DRD2P14416 443 aa15.34■□□□□ 0.05
CPSF1-207ENST00000531727 IMPDH1P20839 514 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms