RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 ETS1P14921 441 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 HIST1H2ADP20671 130 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 GSTM2P28161 218 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 SLC37A1P57057 533 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 DEFA6Q01524 100 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 SLBPQ14493 270 aaKnown RBP eCLIP7.38□□□□□ -1.23
CD44-232ENST00000531118 GUSBP1Q15486 140 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 EXOC3L2Q2M3D2 409 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 PGGHGQ32M88 737 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 ZNF672Q499Z4 452 aaPredicted RBP7.38□□□□□ -1.23
CD44-232ENST00000531118 HP1BP3Q5SSJ5 553 aaPredicted RBP7.38□□□□□ -1.23
CD44-232ENST00000531118 CASC4Q6P4E1 433 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 ABHD17CQ6PCB6 329 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 STAC2Q6ZMT1 411 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 ZNF793Q6ZN11 406 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 DTX2Q86UW9 622 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 THOC6Q86W42 341 aaKnown RBP7.38□□□□□ -1.23
CD44-232ENST00000531118 OR4N5Q8IXE1 308 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 ZNF610Q8N9Z0 462 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 RDH11Q8TC12 318 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 LINGO1Q96FE5 620 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 HIST1H2AHQ96KK5 128 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 SFXN2Q96NB2 322 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 HIST1H2AJQ99878 128 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 H2AFJQ9BTM1 129 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 NTMT1Q9BV86 223 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 ACTR6Q9GZN1 396 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 REXO4Q9GZR2 422 aaKnown RBP7.38□□□□□ -1.23
CD44-232ENST00000531118 METTL7AQ9H8H3 244 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 EML4Q9HC35 981 aaKnown RBP7.38□□□□□ -1.23
CD44-232ENST00000531118 GALNT9Q9HCQ5 603 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 SNX15Q9NRS6 342 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 COMMD10Q9Y6G5 202 aa7.38□□□□□ -1.23
CD44-232ENST00000531118 WNK1Q9H4A3 2382 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 IQANK1A0A1B0GTG1 560 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 F8W735 103 aaPredicted RBP7.37□□□□□ -1.23
CD44-232ENST00000531118 KIAA0513O60268 411 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 CDH16O75309 829 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 CLEC3AO75596 197 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 GUCA1CO95843 209 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 ALOX15P16050 662 aaPredicted RBP7.37□□□□□ -1.23
CD44-232ENST00000531118 PTGDSP41222 190 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 GATA4P43694 442 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 NPY2RP49146 381 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 COMPP49747 757 aaPredicted RBP7.37□□□□□ -1.23
CD44-232ENST00000531118 GZMKP49863 264 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 DSCR9P59020 149 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 ACTG1P63261 375 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 BASP1P80723 227 aaKnown RBP7.37□□□□□ -1.23
CD44-232ENST00000531118 TIAL1Q01085 375 aaKnown RBP eCLIP7.37□□□□□ -1.23
CD44-232ENST00000531118 PRR31Q5SQ13 230 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 ADNP2Q6IQ32 1131 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 TMEM81Q6P7N7 255 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 AAGABQ6PD74 315 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 TMIGD1Q6UXZ0 262 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 PRR22Q8IZ63 422 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 BBOF1Q8ND07 529 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 SEMA6DQ8NFY4 1073 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 PPWD1Q96BP3 646 aaKnown RBP7.37□□□□□ -1.23
CD44-232ENST00000531118 ZNF669Q96BR6 464 aaPredicted RBP7.37□□□□□ -1.23
CD44-232ENST00000531118 C11orf24Q96F05 449 aaPredicted RBP7.37□□□□□ -1.23
CD44-232ENST00000531118 NDNQ99608 321 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 TACO1Q9BSH4 297 aaKnown RBP7.37□□□□□ -1.23
CD44-232ENST00000531118 AKTIPQ9H8T0 292 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 RNF122Q9H9V4 155 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 WWOXQ9NZC7 414 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 IFNKQ9P0W0 207 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 PAK5Q9P286 719 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 ZNF281Q9Y2X9 895 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 SPACA6W5XKT8 324 aa7.37□□□□□ -1.23
CD44-232ENST00000531118 C2orf92A0A1B0GVN3 265 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 GRID2IPA4D2P6 1211 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 AP3B1O00203 1094 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 LIASO43766 372 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 SCELO95171 688 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 MBD3O95983 291 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 CD8AP01732 235 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 ALDOAP04075 364 aaKnown RBP7.36□□□□□ -1.23
CD44-232ENST00000531118 CD3EP07766 207 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 ENO2P09104 434 aaPredicted RBP7.36□□□□□ -1.23
CD44-232ENST00000531118 CPN2P22792 545 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 TCEA1P23193 301 aaKnown RBP7.36□□□□□ -1.23
CD44-232ENST00000531118 SRD5A2P31213 254 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 STIP1P31948 543 aaKnown RBP7.36□□□□□ -1.23
CD44-232ENST00000531118 HPDP32754 393 aaPredicted RBP7.36□□□□□ -1.23
CD44-232ENST00000531118 MAGEA1P43355 309 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 KCNC1P48547 511 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 NRG3P56975 720 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 RPS13P62277 151 aaKnown RBP7.36□□□□□ -1.23
CD44-232ENST00000531118 TPM4P67936 248 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 DHX34Q14147 1143 aaKnown RBP7.36□□□□□ -1.23
CD44-232ENST00000531118 ZNF267Q14586 743 aaPredicted RBP7.36□□□□□ -1.23
CD44-232ENST00000531118 CYP1B1Q16678 543 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 NCMAPQ5T1S8 102 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 HIST2H2BDQ6DRA6 164 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 Q6ZS46 218 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 LUZP1Q86V48 1076 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 GPSM1Q86YR5 675 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 UBQLNLQ8IYU4 475 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 ST13P4Q8IZP2 240 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms