RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 SPIBQ01892 262 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 ASAH1Q13510 395 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 SMN1Q16637 294 aaKnown RBP10.92□□□□□ -0.66
USP35-207ENST00000530546 RPS26P11Q5JNZ5 115 aaPredicted RBP10.92□□□□□ -0.66
USP35-207ENST00000530546 PXDC1Q5TGL8 231 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 KDM4DQ6B0I6 523 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 Q6ZPB1 254 aaPredicted RBP10.92□□□□□ -0.66
USP35-207ENST00000530546 VWA5B2Q8N398 1253 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 TMEM145Q8NBT3 493 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 MYDGFQ969H8 173 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.92□□□□□ -0.66
USP35-207ENST00000530546 PCBD2Q9H0N5 130 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 KLHL31Q9H511 634 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 LHX9Q9NQ69 397 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 TIGARQ9NQ88 270 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 TMEM184CQ9NVA4 438 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 AUP1Q9Y679 476 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 IGKV1-8A0A0C4DH67 115 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 LOC100506127A0A0U1RQW1 187 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 H0Y8X5 98 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 TNFRSF11BO00300 401 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 CACNB4O00305 520 aaPredicted RBP10.92□□□□□ -0.66
USP35-207ENST00000530546 CD72P21854 359 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 TALDO1P37837 337 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 CDH12P55289 794 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 CD83Q01151 205 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 SCN1BQ07699 218 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 IQCCQ4KMZ1 466 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 IFI44LQ53G44 452 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 KIAA1324Q6UXG2 1013 aaKnown RBP10.92□□□□□ -0.66
USP35-207ENST00000530546 CEACAM20Q6UY09 585 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 IKBIPQ70UQ0 350 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 TSEN54Q7Z6J9 526 aaKnown RBP10.92□□□□□ -0.66
USP35-207ENST00000530546 AMIGO1Q86WK6 493 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 NUDT13Q86X67 352 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 IL17RCQ8NAC3 791 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 GALNT11Q8NCW6 608 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 OR2A1Q8NGT9 310 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 RGMAQ96B86 450 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 MTERF3Q96E29 417 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 COPS4Q9BT78 406 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 GTPBP2Q9BX10 602 aaKnown RBP10.92□□□□□ -0.66
USP35-207ENST00000530546 CLDND1Q9NY35 253 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 SPHK1Q9NYA1 384 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 NDUFAF4Q9P032 175 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 LINC00862A6NCI5 91 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 PLRG1O43660 514 aaKnown RBP10.92□□□□□ -0.66
USP35-207ENST00000530546 MYL9P24844 172 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 AK4P27144 223 aaPredicted RBP10.92□□□□□ -0.66
USP35-207ENST00000530546 TNFRSF4P43489 277 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 DSTNP60981 165 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 PRDX1Q06830 199 aaKnown RBP10.92□□□□□ -0.66
USP35-207ENST00000530546 HEPACAMQ14CZ8 416 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 TIMM50Q3ZCQ8 353 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 KIAA1614Q5VZ46 1190 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 GPR153Q6NV75 609 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 UBE3DQ7Z6J8 389 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 OR4M1Q8NGD0 313 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 OTUB1Q96FW1 271 aaPredicted RBP10.92□□□□□ -0.66
USP35-207ENST00000530546 FRMD6Q96NE9 622 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 KCNC2Q96PR1 638 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 PITX2Q99697 317 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 MRPS30Q9NP92 439 aaKnown RBP10.92□□□□□ -0.66
USP35-207ENST00000530546 RHCGQ9UBD6 479 aa10.92□□□□□ -0.66
USP35-207ENST00000530546 PLXND1Q9Y4D7 1925 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 A0A1W2PQF6 199 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 PRAMEF25A6NGN4 478 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 PRAMEF10O60809 474 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 WBP4O75554 376 aaKnown RBP10.91□□□□□ -0.66
USP35-207ENST00000530546 OR2B3O76000 313 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 ALPPL2P10696 532 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 UQCRC2P22695 453 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 TNFSF8P32971 234 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 CSTF2P33240 577 aaKnown RBP eCLIP10.91□□□□□ -0.66
USP35-207ENST00000530546 TP53BP2Q13625 1128 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 GANABQ14697 944 aaKnown RBP10.91□□□□□ -0.66
USP35-207ENST00000530546 MLIPQ5VWP3 458 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 ENPP7Q6UWV6 458 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 HORMAD2Q8N7B1 307 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 SIPA1Q96FS4 1042 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 Q96MT0 163 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 TEFMQ96QE5 360 aaKnown RBP10.91□□□□□ -0.66
USP35-207ENST00000530546 PLCXD1Q9NUJ7 323 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 ICKQ9UPZ9 632 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 SLC17A4Q9Y2C5 497 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 PCDHGB3Q9Y5G1 929 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 EYSQ5T1H1 3165 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 ISM1B1AKI9 464 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 C5orf58C9J3I9 102 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 TFECO14948 347 aaPredicted RBP10.91□□□□□ -0.66
USP35-207ENST00000530546 BCHEP06276 602 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 CBLP22681 906 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 CTHP32929 405 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 BCL6P41182 706 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 HYAL2Q12891 473 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 IKZF1Q13422 519 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 AGERQ15109 404 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 RPE65Q16518 533 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 KIAA1161Q6NSJ0 714 aa10.91□□□□□ -0.66
USP35-207ENST00000530546 TMEM184AQ6ZMB5 413 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms