RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 A0A1B0GTQ1 180 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 A0A1B0GUL7 405 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 OR6C74A6NCV1 312 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 CLDN4O14493 209 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 OGTO15294 1046 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 NVLO15381 856 aaKnown RBP5.09□□□□□ -1.59
PCF11-202ENST00000528336 YKT6O15498 198 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 KRT14P02533 472 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 IRF2P14316 349 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 ACAT1P24752 427 aaKnown RBP5.09□□□□□ -1.59
PCF11-202ENST00000528336 CSTF2P33240 577 aaKnown RBP eCLIP5.09□□□□□ -1.59
PCF11-202ENST00000528336 SLC6A12P48065 614 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 ASCL1P50553 236 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 CNN1P51911 297 aaKnown RBP5.09□□□□□ -1.59
PCF11-202ENST00000528336 GALK2Q01415 458 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 ARHGAP1Q07960 439 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 CUL3Q13618 768 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 TEAD2Q15562 447 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 ADAMTSL4-AS1Q5T5F5 129 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 PDPK2PQ6A1A2 396 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 PAQR9Q6ZVX9 377 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 DEFB132Q7Z7B7 95 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 GRAMD2AQ8IUY3 354 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 KLHDC8AQ8IYD2 350 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 KIRREL3Q8IZU9 778 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 CENPLQ8N0S6 344 aaPredicted RBP5.09□□□□□ -1.59
PCF11-202ENST00000528336 OR13C3Q8NGS6 347 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 NCLNQ969V3 563 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 ESAMQ96AP7 390 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 MAGED4Q96JG8 741 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 IFT74Q96LB3 600 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 SPAG8Q99932 426 aaPredicted RBP5.09□□□□□ -1.59
PCF11-202ENST00000528336 CCDC3Q9BQI4 270 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 FICDQ9BVA6 458 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 PINK1Q9BXM7 581 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 PRRG4Q9BZD6 226 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 CPVLQ9H3G5 476 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 FN3KQ9H479 309 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 TDRD3Q9H7E2 651 aaKnown RBP5.09□□□□□ -1.59
PCF11-202ENST00000528336 ATP13A3Q9H7F0 1226 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 PLCXD1Q9NUJ7 323 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 ETNK2Q9NVF9 386 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 FAM120CQ9NX05 1096 aaKnown RBP5.09□□□□□ -1.59
PCF11-202ENST00000528336 CNOT2Q9NZN8 540 aaKnown RBP5.09□□□□□ -1.59
PCF11-202ENST00000528336 KLHL8Q9P2G9 620 aaPredicted RBP5.09□□□□□ -1.59
PCF11-202ENST00000528336 CHRNA9Q9UGM1 479 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 KIAA1257Q9ULG3 409 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 MGAT4BQ9UQ53 548 aa5.09□□□□□ -1.59
PCF11-202ENST00000528336 SBF2Q86WG5 1849 aa5.09□□□□□ -1.6
PCF11-202ENST00000528336 MEIOCA2RUB1 952 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 KBTBD13C9JR72 458 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 SERPINA3P01011 423 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 CGAP01215 116 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 ZNF3P17036 446 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 CEBPBP17676 345 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 HMGB2P26583 209 aaKnown RBP5.08□□□□□ -1.6
PCF11-202ENST00000528336 MAGEA1P43355 309 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 AIF1P55008 147 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 MFAP3P55082 362 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 MAP3K7CLP57077 242 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 LIPEQ05469 1076 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 CCDC173Q0VFZ6 552 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 PDK3Q15120 406 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 NKAIN1Q4KMZ8 207 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 LBHQ53QV2 105 aaPredicted RBP5.08□□□□□ -1.6
PCF11-202ENST00000528336 PMF1Q6P1K2 205 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 B3GLCTQ6Y288 498 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 KIF6Q6ZMV9 814 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 Q6ZSR9 355 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 LUZP1Q86V48 1076 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 CD302Q8IX05 232 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 AQP12AQ8IXF9 295 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 SLC43A2Q8N370 569 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 RAB42Q8N4Z0 105 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 TRIML2Q8N7C3 387 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 BMPERQ8N8U9 685 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 OR4K1Q8NGD4 311 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 OR2T6Q8NHC8 308 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 SLC22A8Q8TCC7 542 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 SLC26A7Q8TE54 656 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 LIPHQ8WWY8 451 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 STARD8Q92502 1023 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 CATSPER2Q96P56 530 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 IQCGQ9H095 443 aaKnown RBP5.08□□□□□ -1.6
PCF11-202ENST00000528336 ATXN10Q9UBB4 475 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 EPHA6Q9UF33 1036 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 BARX2Q9UMQ3 279 aaPredicted RBP5.08□□□□□ -1.6
PCF11-202ENST00000528336 PLA2G4CQ9UP65 541 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 NIP7Q9Y221 180 aaKnown RBP eCLIP5.08□□□□□ -1.6
PCF11-202ENST00000528336 WDR83OSQ9Y284 106 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 C15orf41Q9Y2V0 281 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 RGPD3A6NKT7 1758 aaPredicted RBP5.08□□□□□ -1.6
PCF11-202ENST00000528336 RGPD4Q7Z3J3 1758 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 SCN11AQ9UI33 1791 aa5.08□□□□□ -1.6
PCF11-202ENST00000528336 BTAF1O14981 1849 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 MYO3BQ8WXR4 1341 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 MACROD2A1Z1Q3 448 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 FAM149AA5PLN7 773 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 OR52A4PA6NMU1 304 aa5.07□□□□□ -1.6
PCF11-202ENST00000528336 SPECC1L-ADORA2AF8WAN1 911 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms