RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 EML6Q6ZMW3 1958 aa30.34■■■□□ 2.45
SSSCA1-205ENST00000527920 ATP6AP2A0A1C7CYW4 349 aa30.33■■■□□ 2.45
SSSCA1-205ENST00000527920 NPHS1O60500 1241 aa30.33■■■□□ 2.45
SSSCA1-205ENST00000527920 PPM1BO75688 479 aa30.33■■■□□ 2.45
SSSCA1-205ENST00000527920 ATP6AP2O75787 350 aa30.33■■■□□ 2.45
SSSCA1-205ENST00000527920 NEFHP12036 1026 aa30.33■■■□□ 2.45
SSSCA1-205ENST00000527920 MRPS35P82673 323 aaKnown RBP30.33■■■□□ 2.45
SSSCA1-205ENST00000527920 EMC4Q5J8M3 183 aa30.33■■■□□ 2.45
SSSCA1-205ENST00000527920 CLEC6AQ6EIG7 209 aa30.33■■■□□ 2.45
SSSCA1-205ENST00000527920 TMEM211Q6ICI0 200 aa30.33■■■□□ 2.45
SSSCA1-205ENST00000527920 NOXRED1Q6NXP6 359 aa30.33■■■□□ 2.45
SSSCA1-205ENST00000527920 SIMC1Q8NDZ2 872 aa30.33■■■□□ 2.45
SSSCA1-205ENST00000527920 OR9A2Q8NGT5 310 aa30.33■■■□□ 2.45
SSSCA1-205ENST00000527920 NTNG2Q96CW9 530 aa30.33■■■□□ 2.45
SSSCA1-205ENST00000527920 STMN4Q9H169 189 aaPredicted RBP30.33■■■□□ 2.45
SSSCA1-205ENST00000527920 ACKR4Q9NPB9 350 aa30.33■■■□□ 2.45
SSSCA1-205ENST00000527920 NOL12Q9UGY1 213 aaKnown RBP eCLIP30.33■■■□□ 2.45
SSSCA1-205ENST00000527920 HRH3Q9Y5N1 445 aa30.33■■■□□ 2.45
SSSCA1-205ENST00000527920 V9GYY5 206 aaPredicted RBP30.33■■■□□ 2.45
SSSCA1-205ENST00000527920 FRG2CA6NGY1 282 aa30.32■■■□□ 2.44
SSSCA1-205ENST00000527920 TO15178 435 aa30.32■■■□□ 2.44
SSSCA1-205ENST00000527920 PLOD3O60568 738 aa30.32■■■□□ 2.44
SSSCA1-205ENST00000527920 SLITRK5O94991 958 aa30.32■■■□□ 2.44
SSSCA1-205ENST00000527920 CHEK2O96017 543 aa30.32■■■□□ 2.44
SSSCA1-205ENST00000527920 ABCB1P08183 1280 aaPredicted RBP30.32■■■□□ 2.44
SSSCA1-205ENST00000527920 CELA3AP09093 270 aa30.32■■■□□ 2.44
SSSCA1-205ENST00000527920 ALDH3A1P30838 453 aa30.32■■■□□ 2.44
SSSCA1-205ENST00000527920 PSPHP78330 225 aa30.32■■■□□ 2.44
SSSCA1-205ENST00000527920 C2orf80Q0P641 193 aa30.32■■■□□ 2.44
SSSCA1-205ENST00000527920 KIAA0040Q15053 153 aa30.32■■■□□ 2.44
SSSCA1-205ENST00000527920 SP5Q6BEB4 398 aaPredicted RBP30.32■■■□□ 2.44
SSSCA1-205ENST00000527920 FAM9CQ8IZT9 166 aa30.32■■■□□ 2.44
SSSCA1-205ENST00000527920 BTBD9Q96Q07 612 aa30.32■■■□□ 2.44
SSSCA1-205ENST00000527920 PARD6BQ9BYG5 372 aa30.32■■■□□ 2.44
SSSCA1-205ENST00000527920 SENP1Q9P0U3 644 aa30.32■■■□□ 2.44
SSSCA1-205ENST00000527920 SLC17A7Q9P2U7 560 aa30.32■■■□□ 2.44
SSSCA1-205ENST00000527920 MYO1GB0I1T2 1018 aa30.31■■■□□ 2.44
SSSCA1-205ENST00000527920 NPIPA2E9PIF3 369 aa30.31■■■□□ 2.44
SSSCA1-205ENST00000527920 NPIPA3F8WFD2 350 aa30.31■■■□□ 2.44
SSSCA1-205ENST00000527920 HNRNPRO43390 633 aaKnown RBP30.31■■■□□ 2.44
SSSCA1-205ENST00000527920 RGS14O43566 566 aa30.31■■■□□ 2.44
SSSCA1-205ENST00000527920 FGF4P08620 206 aa30.31■■■□□ 2.44
SSSCA1-205ENST00000527920 RFPL3SP0C7P2 107 aa30.31■■■□□ 2.44
SSSCA1-205ENST00000527920 HTR1EP28566 365 aa30.31■■■□□ 2.44
SSSCA1-205ENST00000527920 ERCC6LQ2NKX8 1250 aa30.31■■■□□ 2.44
SSSCA1-205ENST00000527920 KANK2Q63ZY3 851 aa30.31■■■□□ 2.44
SSSCA1-205ENST00000527920 TMEM198Q66K66 360 aa30.31■■■□□ 2.44
SSSCA1-205ENST00000527920 TICAM1Q8IUC6 712 aa30.31■■■□□ 2.44
SSSCA1-205ENST00000527920 TCP10LQ8TDR4 215 aa30.31■■■□□ 2.44
SSSCA1-205ENST00000527920 RILPQ96NA2 401 aa30.31■■■□□ 2.44
SSSCA1-205ENST00000527920 MIEF1Q9NQG6 463 aa30.31■■■□□ 2.44
SSSCA1-205ENST00000527920 C1orf109Q9NX04 203 aa30.31■■■□□ 2.44
SSSCA1-205ENST00000527920 GPR55Q9Y2T6 319 aaPredicted RBP30.31■■■□□ 2.44
SSSCA1-205ENST00000527920 POLR3HQ9Y535 204 aaPredicted RBP30.31■■■□□ 2.44
SSSCA1-205ENST00000527920 TRGV5A0A0B4J1U4 118 aa30.3■■■□□ 2.44
SSSCA1-205ENST00000527920 CLDN14O95500 239 aa30.3■■■□□ 2.44
SSSCA1-205ENST00000527920 CASP3P42574 277 aa30.3■■■□□ 2.44
SSSCA1-205ENST00000527920 MAN2A2P49641 1150 aa30.3■■■□□ 2.44
SSSCA1-205ENST00000527920 PLCXD2Q0VAA5 305 aa30.3■■■□□ 2.44
SSSCA1-205ENST00000527920 GXYLT1Q4G148 440 aa30.3■■■□□ 2.44
SSSCA1-205ENST00000527920 NCCRP1Q6ZVX7 275 aaPredicted RBP30.3■■■□□ 2.44
SSSCA1-205ENST00000527920 NUP54Q7Z3B4 507 aa30.3■■■□□ 2.44
SSSCA1-205ENST00000527920 PRR22Q8IZ63 422 aa30.3■■■□□ 2.44
SSSCA1-205ENST00000527920 SARAFQ96BY9 339 aa30.3■■■□□ 2.44
SSSCA1-205ENST00000527920 ZNF764Q96H86 408 aaPredicted RBP30.3■■■□□ 2.44
SSSCA1-205ENST00000527920 FCRL1Q96LA6 429 aa30.3■■■□□ 2.44
SSSCA1-205ENST00000527920 BBS4Q96RK4 519 aa30.3■■■□□ 2.44
SSSCA1-205ENST00000527920 LRTM1Q9HBL6 345 aa30.3■■■□□ 2.44
SSSCA1-205ENST00000527920 RAB21Q9UL25 225 aa30.3■■■□□ 2.44
SSSCA1-205ENST00000527920 CELSR2Q9HCU4 2923 aa30.3■■■□□ 2.44
SSSCA1-205ENST00000527920 ITPR2Q14571 2701 aa30.3■■■□□ 2.44
SSSCA1-205ENST00000527920 CRYBG3Q68DQ2 2970 aa30.3■■■□□ 2.44
SSSCA1-205ENST00000527920 FIGNL2A6NMB9 653 aa30.29■■■□□ 2.44
SSSCA1-205ENST00000527920 ESPNB1AK53 854 aa30.29■■■□□ 2.44
SSSCA1-205ENST00000527920 SPAG7O75391 227 aa30.29■■■□□ 2.44
SSSCA1-205ENST00000527920 SEC22BO75396 215 aa30.29■■■□□ 2.44
SSSCA1-205ENST00000527920 LRATO95237 230 aa30.29■■■□□ 2.44
SSSCA1-205ENST00000527920 SERPINB5P36952 375 aa30.29■■■□□ 2.44
SSSCA1-205ENST00000527920 NNATQ16517 81 aa30.29■■■□□ 2.44
SSSCA1-205ENST00000527920 Q6ZSR9 355 aa30.29■■■□□ 2.44
SSSCA1-205ENST00000527920 PACS2Q86VP3 889 aa30.29■■■□□ 2.44
SSSCA1-205ENST00000527920 MARVELD2Q8N4S9 558 aa30.29■■■□□ 2.44
SSSCA1-205ENST00000527920 CDC26Q8NHZ8 85 aa30.29■■■□□ 2.44
SSSCA1-205ENST00000527920 KAT2AQ92830 837 aa30.29■■■□□ 2.44
SSSCA1-205ENST00000527920 HGDQ93099 445 aa30.29■■■□□ 2.44
SSSCA1-205ENST00000527920 OMA1Q96E52 524 aa30.29■■■□□ 2.44
SSSCA1-205ENST00000527920 TMEM41AQ96HV5 264 aa30.29■■■□□ 2.44
SSSCA1-205ENST00000527920 VSTM2LQ96N03 204 aa30.29■■■□□ 2.44
SSSCA1-205ENST00000527920 LDAHQ9H6V9 325 aa30.29■■■□□ 2.44
SSSCA1-205ENST00000527920 EML4Q9HC35 981 aaKnown RBP30.29■■■□□ 2.44
SSSCA1-205ENST00000527920 COQ3Q9NZJ6 369 aa30.29■■■□□ 2.44
SSSCA1-205ENST00000527920 EXO1Q9UQ84 846 aaKnown RBP30.29■■■□□ 2.44
SSSCA1-205ENST00000527920 DNAJC15Q9Y5T4 150 aa30.29■■■□□ 2.44
SSSCA1-205ENST00000527920 A0A087WV62 115 aa30.28■■■□□ 2.44
SSSCA1-205ENST00000527920 GRNP28799 593 aaKnown RBP30.28■■■□□ 2.44
SSSCA1-205ENST00000527920 SNTA1Q13424 505 aa30.28■■■□□ 2.44
SSSCA1-205ENST00000527920 ARL13AQ5H913 290 aaPredicted RBP30.28■■■□□ 2.44
SSSCA1-205ENST00000527920 JSRP1Q96MG2 331 aaPredicted RBP30.28■■■□□ 2.44
SSSCA1-205ENST00000527920 CCT7Q99832 543 aa30.28■■■□□ 2.44
SSSCA1-205ENST00000527920 MECRQ9BV79 373 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms