RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 FRG2CA6NGY1 282 aa18.94■□□□□ 0.62
VPS28-206ENST00000526734 PLOD3O60568 738 aa18.94■□□□□ 0.62
VPS28-206ENST00000526734 SEC22BO75396 215 aa18.94■□□□□ 0.62
VPS28-206ENST00000526734 PPM1BO75688 479 aa18.94■□□□□ 0.62
VPS28-206ENST00000526734 PDE9AO76083 593 aa18.94■□□□□ 0.62
VPS28-206ENST00000526734 IFI6P09912 130 aa18.94■□□□□ 0.62
VPS28-206ENST00000526734 NTSP30990 170 aa18.94■□□□□ 0.62
VPS28-206ENST00000526734 MAN2A2P49641 1150 aa18.94■□□□□ 0.62
VPS28-206ENST00000526734 EMDP50402 254 aa18.94■□□□□ 0.62
VPS28-206ENST00000526734 FBXW4P57775 412 aa18.94■□□□□ 0.62
VPS28-206ENST00000526734 KANK2Q63ZY3 851 aa18.94■□□□□ 0.62
VPS28-206ENST00000526734 CLEC6AQ6EIG7 209 aa18.94■□□□□ 0.62
VPS28-206ENST00000526734 NUP54Q7Z3B4 507 aa18.94■□□□□ 0.62
VPS28-206ENST00000526734 CROCCP2Q86T23 111 aa18.94■□□□□ 0.62
VPS28-206ENST00000526734 SARAFQ96BY9 339 aa18.94■□□□□ 0.62
VPS28-206ENST00000526734 BTBD9Q96Q07 612 aa18.94■□□□□ 0.62
VPS28-206ENST00000526734 CCT7Q99832 543 aa18.94■□□□□ 0.62
VPS28-206ENST00000526734 ANGPTL4Q9BY76 406 aa18.94■□□□□ 0.62
VPS28-206ENST00000526734 RUBCNLQ9H714 662 aa18.94■□□□□ 0.62
VPS28-206ENST00000526734 LRTM1Q9HBL6 345 aa18.94■□□□□ 0.62
VPS28-206ENST00000526734 PROK2Q9HC23 129 aa18.94■□□□□ 0.62
VPS28-206ENST00000526734 ACKR4Q9NPB9 350 aa18.94■□□□□ 0.62
VPS28-206ENST00000526734 SLC17A7Q9P2U7 560 aa18.94■□□□□ 0.62
VPS28-206ENST00000526734 DTX4Q9Y2E6 619 aa18.94■□□□□ 0.62
VPS28-206ENST00000526734 TMED5Q9Y3A6 229 aa18.94■□□□□ 0.62
VPS28-206ENST00000526734 POLR3HQ9Y535 204 aaPredicted RBP18.94■□□□□ 0.62
VPS28-206ENST00000526734 ATP6AP2A0A1C7CYW4 349 aa18.93■□□□□ 0.62
VPS28-206ENST00000526734 LRRC3CA6NJW4 275 aa18.93■□□□□ 0.62
VPS28-206ENST00000526734 FIGNL2A6NMB9 653 aa18.93■□□□□ 0.62
VPS28-206ENST00000526734 MYO1GB0I1T2 1018 aa18.93■□□□□ 0.62
VPS28-206ENST00000526734 ADAM10O14672 748 aa18.93■□□□□ 0.62
VPS28-206ENST00000526734 ABCB7O75027 752 aa18.93■□□□□ 0.62
VPS28-206ENST00000526734 COQ9O75208 318 aa18.93■□□□□ 0.62
VPS28-206ENST00000526734 TRIM3O75382 744 aaPredicted RBP18.93■□□□□ 0.62
VPS28-206ENST00000526734 ATP6AP2O75787 350 aa18.93■□□□□ 0.62
VPS28-206ENST00000526734 SOX18P35713 384 aa18.93■□□□□ 0.62
VPS28-206ENST00000526734 MRPS35P82673 323 aaKnown RBP18.93■□□□□ 0.62
VPS28-206ENST00000526734 PLCXD2Q0VAA5 305 aa18.93■□□□□ 0.62
VPS28-206ENST00000526734 DUSP8Q13202 625 aa18.93■□□□□ 0.62
VPS28-206ENST00000526734 SNTA1Q13424 505 aa18.93■□□□□ 0.62
VPS28-206ENST00000526734 KRT71Q3SY84 523 aa18.93■□□□□ 0.62
VPS28-206ENST00000526734 TMEM64Q6YI46 380 aa18.93■□□□□ 0.62
VPS28-206ENST00000526734 PACS2Q86VP3 889 aa18.93■□□□□ 0.62
VPS28-206ENST00000526734 TICAM1Q8IUC6 712 aa18.93■□□□□ 0.62
VPS28-206ENST00000526734 CLYBLQ8N0X4 340 aa18.93■□□□□ 0.62
VPS28-206ENST00000526734 OR5M3Q8NGP4 307 aa18.93■□□□□ 0.62
VPS28-206ENST00000526734 OR9A2Q8NGT5 310 aa18.93■□□□□ 0.62
VPS28-206ENST00000526734 CDC26Q8NHZ8 85 aa18.93■□□□□ 0.62
VPS28-206ENST00000526734 FCRL1Q96LA6 429 aa18.93■□□□□ 0.62
VPS28-206ENST00000526734 LDAHQ9H6V9 325 aa18.93■□□□□ 0.62
VPS28-206ENST00000526734 TAS2R9Q9NYW1 312 aa18.93■□□□□ 0.62
VPS28-206ENST00000526734 COQ3Q9NZJ6 369 aa18.93■□□□□ 0.62
VPS28-206ENST00000526734 MYO7BQ6PIF6 2116 aa18.92■□□□□ 0.62
VPS28-206ENST00000526734 A0A087WV62 115 aa18.92■□□□□ 0.62
VPS28-206ENST00000526734 TRGV5A0A0B4J1U4 118 aa18.92■□□□□ 0.62
VPS28-206ENST00000526734 HNRNPRO43390 633 aaKnown RBP18.92■□□□□ 0.62
VPS28-206ENST00000526734 SPAG7O75391 227 aa18.92■□□□□ 0.62
VPS28-206ENST00000526734 CLDN14O95500 239 aa18.92■□□□□ 0.62
VPS28-206ENST00000526734 ABCB1P08183 1280 aaPredicted RBP18.92■□□□□ 0.62
VPS28-206ENST00000526734 DDX5P17844 614 aaKnown RBP18.92■□□□□ 0.62
VPS28-206ENST00000526734 ELAVL4P26378 380 aaKnown RBP18.92■□□□□ 0.62
VPS28-206ENST00000526734 COL8A1P27658 744 aa18.92■□□□□ 0.62
VPS28-206ENST00000526734 KIAA0040Q15053 153 aa18.92■□□□□ 0.62
VPS28-206ENST00000526734 ZNF630Q2M218 657 aaPredicted RBP18.92■□□□□ 0.62
VPS28-206ENST00000526734 FAM180BQ6P0A1 224 aa18.92■□□□□ 0.62
VPS28-206ENST00000526734 OMA1Q96E52 524 aa18.92■□□□□ 0.62
VPS28-206ENST00000526734 DTNBP1Q96EV8 351 aa18.92■□□□□ 0.62
VPS28-206ENST00000526734 TMEM41AQ96HV5 264 aa18.92■□□□□ 0.62
VPS28-206ENST00000526734 RILPQ96NA2 401 aa18.92■□□□□ 0.62
VPS28-206ENST00000526734 SSU72Q9NP77 194 aaKnown RBP18.92■□□□□ 0.62
VPS28-206ENST00000526734 GPR55Q9Y2T6 319 aaPredicted RBP18.92■□□□□ 0.62
VPS28-206ENST00000526734 PCDHGB3Q9Y5G1 929 aa18.92■□□□□ 0.62
VPS28-206ENST00000526734 DNAJC15Q9Y5T4 150 aa18.92■□□□□ 0.62
VPS28-206ENST00000526734 UTP20O75691 2785 aaKnown RBP18.92■□□□□ 0.62
VPS28-206ENST00000526734 NAV2Q8IVL1 2488 aa18.91■□□□□ 0.62
VPS28-206ENST00000526734 NPIPA2E9PIF3 369 aa18.91■□□□□ 0.62
VPS28-206ENST00000526734 NPIPA3F8WFD2 350 aa18.91■□□□□ 0.62
VPS28-206ENST00000526734 RGS16O15492 202 aaPredicted RBP18.91■□□□□ 0.62
VPS28-206ENST00000526734 TYROBPO43914 113 aa18.91■□□□□ 0.62
VPS28-206ENST00000526734 TBX19O60806 448 aa18.91■□□□□ 0.62
VPS28-206ENST00000526734 HOXD4P09016 255 aaPredicted RBP18.91■□□□□ 0.62
VPS28-206ENST00000526734 CASP3P42574 277 aa18.91■□□□□ 0.62
VPS28-206ENST00000526734 MASP1P48740 699 aa18.91■□□□□ 0.62
VPS28-206ENST00000526734 ZNF844Q08AG5 666 aa18.91■□□□□ 0.62
VPS28-206ENST00000526734 ARL13AQ5H913 290 aaPredicted RBP18.91■□□□□ 0.62
VPS28-206ENST00000526734 WLSQ5T9L3 541 aa18.91■□□□□ 0.62
VPS28-206ENST00000526734 ZNF787Q6DD87 383 aa18.91■□□□□ 0.62
VPS28-206ENST00000526734 SLC30A6Q6NXT4 461 aa18.91■□□□□ 0.62
VPS28-206ENST00000526734 ACAD11Q709F0 780 aa18.91■□□□□ 0.62
VPS28-206ENST00000526734 PRR22Q8IZ63 422 aa18.91■□□□□ 0.62
VPS28-206ENST00000526734 LIX1Q8N485 282 aa18.91■□□□□ 0.62
VPS28-206ENST00000526734 ASB5Q8WWX0 329 aa18.91■□□□□ 0.62
VPS28-206ENST00000526734 JSRP1Q96MG2 331 aaPredicted RBP18.91■□□□□ 0.62
VPS28-206ENST00000526734 VSTM2LQ96N03 204 aa18.91■□□□□ 0.62
VPS28-206ENST00000526734 EXO5Q9H790 373 aa18.91■□□□□ 0.62
VPS28-206ENST00000526734 METTL7AQ9H8H3 244 aa18.91■□□□□ 0.62
VPS28-206ENST00000526734 TRAF6Q9Y4K3 522 aa18.91■□□□□ 0.62
VPS28-206ENST00000526734 LIPGQ9Y5X9 500 aa18.91■□□□□ 0.62
VPS28-206ENST00000526734 OR6C70A6NIJ9 312 aa18.9■□□□□ 0.62
VPS28-206ENST00000526734 PLOD2O00469 737 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms