RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 TRMT12Q53H54 448 aaKnown RBP4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 PRR30Q53SZ7 412 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 ANXA8L1Q5VT79 327 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 CES4AQ5XG92 561 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 SLC22A10Q63ZE4 541 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 OGFOD2Q6N063 350 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 ANKRD26P1Q6NSI1 321 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 PAOXQ6QHF9 649 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 FAM111BQ6SJ93 734 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 GFRALQ6UXV0 394 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 C16orf47Q6ZP98 133 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 RGS9BPQ6ZS82 235 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 SLC22A16Q86VW1 577 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 SLC44A2Q8IWA5 706 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 ZNF615Q8N8J6 731 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 OR5M3Q8NGP4 307 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 FAR1Q8WVX9 515 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 OR5P2Q8WZ92 322 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 NR4A3Q92570 626 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 JADE3Q92613 823 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 DIO2Q92813 273 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 CIDECQ96AQ7 238 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 MIB2Q96AX9 1013 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 MOAP1Q96BY2 351 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 CTHRC1Q96CG8 243 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 TMCO6Q96DC7 493 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 ELP4Q96EB1 424 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 CHMP6Q96FZ7 201 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 ZNF597Q96LX8 424 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 MAGEB18Q96M61 343 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 FRMD6Q96NE9 622 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 MS4A4EQ96PG1 132 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 BTBD9Q96Q07 612 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 SECISBP2Q96T21 854 aaKnown RBP4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 FAM173AQ9BQD7 235 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 DOHHQ9BU89 302 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 DUSP26Q9BV47 211 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 ITPAQ9BY32 194 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 C20orf27Q9GZN8 174 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 GLIPR2Q9H4G4 154 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 METTL7AQ9H8H3 244 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 FOLH1BQ9HBA9 442 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 Q9N2J8 555 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 EQTNQ9NQ60 294 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 SEC14L3Q9UDX4 400 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 ZNF639Q9UID6 485 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 FAF1Q9UNN5 650 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 C19orf53Q9UNZ5 99 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 SNX8Q9Y5X2 465 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 NPFFR2Q9Y5X5 522 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 DSPP15924 2871 aaKnown RBP4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 SEC16AO15027 2179 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 CACNA1GO43497 2377 aa4.99□□□□□ -1.61
HMGB1P40-201ENST00000525121 ZFYVE26Q68DK2 2539 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 ASPDHA6ND91 283 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 TMEM200CA6NKL6 621 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 E9PBE3 544 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 SDHDO14521 159 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 UBDO15205 165 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 EMC8O43402 210 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 REM1O75628 298 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 PPM1BO75688 479 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 SOX30O94993 753 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 SNX4O95219 450 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 NADKO95544 446 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 CLPSP04118 112 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 ABCB1P08183 1280 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 ALOX5P09917 674 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 TROVE2P10155 538 aaKnown RBP eCLIP4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 S1PR1P21453 382 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 CNR1P21554 472 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 ABCD3P28288 659 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 EPHA3P29320 983 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 S100A3P33764 101 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 CLK3P49761 638 aaKnown RBP4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 EMDP50402 254 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 ST13P50502 369 aaKnown RBP4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 ANXA11P50995 505 aaKnown RBP4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 PRKAG1P54619 331 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 DIO3P55073 304 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 PER3P56645 1201 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 GPR85P60893 370 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 IRX1P78414 480 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 PMP22Q01453 160 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 DUSP2Q05923 314 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 MGAT2Q10469 447 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 MLC1Q15049 377 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 IGFBP7Q16270 282 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 NTRK2Q16620 822 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 DECR1Q16698 335 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 ZNF791Q3KP31 576 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 CYP27C1Q4G0S4 372 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 KRTCAP3Q53RY4 240 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 ZNF468Q5VIY5 522 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 PRAMEF20Q5VT98 475 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 TMEM198Q66K66 360 aa4.98□□□□□ -1.61
HMGB1P40-201ENST00000525121 BNC2Q6ZN30 1099 aaPredicted RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms