RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 ZNF614Q8N883 585 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 C1orf131Q8NDD1 294 aaKnown RBP3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 OR8K5Q8NH50 307 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 TRPC4APQ8TEL6 797 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 AGAP11Q8TF27 550 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 DDI1Q8WTU0 396 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 FBXO32Q969P5 355 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 MYLPFQ96A32 169 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 GIMAP5Q96F15 307 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 MAGED4Q96JG8 741 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 PRAC1Q96KF2 57 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 LXNQ9BS40 222 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 TRIM7Q9C029 511 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 SEMA6AQ9H2E6 1030 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 KCNJ16Q9NPI9 418 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 EIF2B3Q9NR50 452 aaKnown RBP3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 PLCXD1Q9NUJ7 323 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 TRMT1Q9NXH9 659 aaKnown RBP3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 GGA2Q9UJY4 613 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 MTMR6Q9Y217 621 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 KCNE2Q9Y6J6 123 aa3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 RAI1Q7Z5J4 1906 aaPredicted RBP3.19□□□□□ -1.9
NSMCE2-211ENST00000523549 PRR14LQ5THK1 2151 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 CPAMD8Q8IZJ3 1885 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 PLCE1Q9P212 2302 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 A0A087WWV3 80 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 SMCO2A6NFE2 343 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 MYO1GB0I1T2 1018 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 IFIT3O14879 490 aaKnown RBP3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 SMAD9O15198 467 aaKnown RBP3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 ZBTB43O43298 467 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 USO1O60763 962 aaKnown RBP3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 TRMUO75648 421 aaKnown RBP3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 AP2A2O94973 939 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 PRB2P02812 416 aaPredicted RBP3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 HMBSP08397 361 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 ALPIP09923 528 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 DNAH10OSP0CZ25 163 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 CTSEP14091 401 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 PVRP15151 417 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 TNFAIP3P21580 790 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 MUTP22033 750 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 CBLP22681 906 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 ACADLP28330 430 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 SHC1P29353 583 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 CEACAM8P31997 349 aaPredicted RBP3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 CD70P32970 193 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 BSGP35613 385 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 MAGEA11P43364 429 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 CLNS1AP54105 237 aaKnown RBP3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 RPS3AP61247 264 aaKnown RBP3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 SNRPD1P62314 119 aaKnown RBP3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 RPS15P62841 145 aaKnown RBP3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 CRYMQ14894 314 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 ELOCQ15369 112 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 TBCEQ15813 527 aaPredicted RBP3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 ZBTB6Q15916 424 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 BMP2KLQ5H9B9 411 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 C6orf52Q5T4I8 152 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 PIP5KL1Q5T9C9 394 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 KCTD16Q68DU8 428 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 ARSKQ6UWY0 536 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 STRADAQ7RTN6 431 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 ZNF589Q86UQ0 364 aaPredicted RBP3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 GKN2Q86XP6 184 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 CCDC71Q8IV32 467 aaPredicted RBP3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 CLYBLQ8N0X4 340 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 MARVELD2Q8N4S9 558 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 SYT2Q8N9I0 419 aaPredicted RBP3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 CATSPER1Q8NEC5 780 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 LILRB4Q8NHJ6 448 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 WFDC5Q8TCV5 224 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 PHF10Q8WUB8 498 aaKnown RBP3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 ZNRF4Q8WWF5 429 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 SEMA4DQ92854 862 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 TSACCQ96A04 125 aaPredicted RBP3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 CCDC127Q96BQ5 260 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 ZBED6CLQ96FA7 236 aaPredicted RBP3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 FOXN4Q96NZ1 517 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 EDEM3Q9BZQ6 932 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 SHARPINQ9H0F6 387 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 C2orf40Q9H1Z8 148 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 ZNF69Q9UC07 566 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 UBQLN1Q9UMX0 589 aaKnown RBP3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 RNF6Q9Y252 685 aa3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 R3HDM2Q9Y2K5 976 aaKnown RBP3.18□□□□□ -1.9
NSMCE2-211ENST00000523549 IGHV1OR21-1A0A087WYE8 117 aa3.17□□□□□ -1.9
NSMCE2-211ENST00000523549 IGHV4-61A0A0C4DH41 118 aa3.17□□□□□ -1.9
NSMCE2-211ENST00000523549 A0A0D9SFI3 127 aa3.17□□□□□ -1.9
NSMCE2-211ENST00000523549 EDDM13A0A1B0GTR0 161 aa3.17□□□□□ -1.9
NSMCE2-211ENST00000523549 A8MU10 97 aa3.17□□□□□ -1.9
NSMCE2-211ENST00000523549 J3QR06 171 aa3.17□□□□□ -1.9
NSMCE2-211ENST00000523549 PIRO00625 290 aa3.17□□□□□ -1.9
NSMCE2-211ENST00000523549 AP3D1O14617 1153 aa3.17□□□□□ -1.9
NSMCE2-211ENST00000523549 FPGTO14772 594 aa3.17□□□□□ -1.9
NSMCE2-211ENST00000523549 TCF21O43680 179 aa3.17□□□□□ -1.9
NSMCE2-211ENST00000523549 IGHV4-59P01825 116 aa3.17□□□□□ -1.9
NSMCE2-211ENST00000523549 ATP5BP06576 529 aaKnown RBP3.17□□□□□ -1.9
NSMCE2-211ENST00000523549 POLR2EP19388 210 aaKnown RBP3.17□□□□□ -1.9
NSMCE2-211ENST00000523549 CYP3A5P20815 502 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms