RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 FBXL2Q9UKC9 423 aa12.41□□□□□ -0.42
NKX3-1-202ENST00000523261 ZNF490Q9ULM2 529 aaPredicted RBP12.41□□□□□ -0.42
NKX3-1-202ENST00000523261 PACSIN2Q9UNF0 486 aaPredicted RBP12.41□□□□□ -0.42
NKX3-1-202ENST00000523261 GPR52Q9Y2T5 361 aa12.41□□□□□ -0.42
NKX3-1-202ENST00000523261 GRID2IPA4D2P6 1211 aa12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 PRKRAO75569 313 aaKnown RBP12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 VENTXO95231 258 aa12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 FESP07332 822 aa12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 NAGAP17050 411 aa12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 TPSB2P20231 275 aa12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 PSMB1P20618 241 aaKnown RBP12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 PTNP21246 168 aa12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 TCEA1P23193 301 aaKnown RBP12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 CNTFP26441 200 aa12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 CDK16Q00536 496 aa12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 SNX1Q13596 522 aa12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 PON3Q15166 354 aa12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 TPSAB1Q15661 275 aa12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 CR1LQ2VPA4 569 aa12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 CTU2Q2VPK5 515 aaKnown RBP12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 C18orf63Q68DL7 685 aa12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 NUP54Q7Z3B4 507 aa12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 LMNTD2Q8IXW0 634 aa12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 ZNF615Q8N8J6 731 aa12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 SRFBP1Q8NEF9 429 aaKnown RBP12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 C17orf47Q8NEP4 570 aa12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 OR6K3Q8NGY3 331 aa12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 CALR3Q96L12 384 aaKnown RBP12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 CACNG6Q9BXT2 260 aa12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 NXF5Q9H1B4 397 aaKnown RBP12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 CISD1Q9NZ45 108 aaKnown RBP12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 MOCS1Q9NZB8 636 aa12.4□□□□□ -0.42
NKX3-1-202ENST00000523261 SYCE3A1L190 88 aa12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 PRAMEF25A6NGN4 478 aa12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 WASHC1A8K0Z3 465 aa12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 PRAMEF4O60810 478 aa12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 AQP8O94778 261 aa12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 GPR75O95800 540 aa12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 ALDOAP04075 364 aaKnown RBP12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 TPM1P09493 284 aa12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 GALNSP34059 522 aa12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 GDF5P43026 501 aa12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 SUCLG1P53597 346 aaKnown RBP12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 PGGT1BP53609 377 aa12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 TNFRSF17Q02223 184 aa12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 BSPH1Q075Z2 132 aa12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 PDCD2Q16342 344 aaPredicted RBP12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 AP5B1Q2VPB7 878 aa12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 PRAMEF9Q5VWM5 478 aa12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 UBL4BQ8N7F7 174 aa12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 SEMA6DQ8NFY4 1073 aa12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 CALML6Q8TD86 181 aa12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 HTRA1Q92743 480 aa12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 S100PBPQ96BU1 408 aa12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 PRR14Q9BWN1 585 aa12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 MS4A8Q9BY19 250 aa12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 CXorf21Q9HAI6 301 aa12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 FANCFQ9NPI8 374 aa12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 C20orf96Q9NUD7 363 aaPredicted RBP12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 FAIMQ9NVQ4 179 aa12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 DKKL1Q9UK85 242 aa12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 EMC9Q9Y3B6 208 aa12.39□□□□□ -0.43
NKX3-1-202ENST00000523261 VWFP04275 2813 aa12.38□□□□□ -0.43
NKX3-1-202ENST00000523261 TMEM89A2RUT3 159 aa12.38□□□□□ -0.43
NKX3-1-202ENST00000523261 B4DXG7 233 aa12.38□□□□□ -0.43
NKX3-1-202ENST00000523261 WDR47O94967 919 aa12.38□□□□□ -0.43
NKX3-1-202ENST00000523261 TPM3P06753 285 aa12.38□□□□□ -0.43
NKX3-1-202ENST00000523261 PYGBP11216 843 aa12.38□□□□□ -0.43
NKX3-1-202ENST00000523261 IL11P20809 199 aa12.38□□□□□ -0.43
NKX3-1-202ENST00000523261 SSR2P43308 183 aa12.38□□□□□ -0.43
NKX3-1-202ENST00000523261 NEK2P51955 445 aa12.38□□□□□ -0.43
NKX3-1-202ENST00000523261 NAP1L1P55209 391 aaKnown RBP12.38□□□□□ -0.43
NKX3-1-202ENST00000523261 EEFSECP57772 596 aaKnown RBP12.38□□□□□ -0.43
NKX3-1-202ENST00000523261 ACTG1P63261 375 aa12.38□□□□□ -0.43
NKX3-1-202ENST00000523261 C18orf21Q32NC0 220 aaPredicted RBP12.38□□□□□ -0.43
NKX3-1-202ENST00000523261 AGAP6Q5VW22 663 aa12.38□□□□□ -0.43
NKX3-1-202ENST00000523261 C11orf71Q6IPW1 123 aa12.38□□□□□ -0.43
NKX3-1-202ENST00000523261 SEZ6L2Q6UXD5 910 aa12.38□□□□□ -0.43
NKX3-1-202ENST00000523261 BEND4Q6ZU67 534 aa12.38□□□□□ -0.43
NKX3-1-202ENST00000523261 BANPQ8N9N5 519 aa12.38□□□□□ -0.43
NKX3-1-202ENST00000523261 SORBS1Q9BX66 1292 aaKnown RBP12.38□□□□□ -0.43
NKX3-1-202ENST00000523261 OR10A5Q9H207 317 aa12.38□□□□□ -0.43
NKX3-1-202ENST00000523261 ZNF696Q9H7X3 374 aa12.38□□□□□ -0.43
NKX3-1-202ENST00000523261 NGBQ9NPG2 151 aa12.38□□□□□ -0.43
NKX3-1-202ENST00000523261 MS4A12Q9NXJ0 267 aa12.38□□□□□ -0.43
NKX3-1-202ENST00000523261 UQCRHLA0A096LP55 91 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 DPRXA6NFQ7 191 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 MIF4GDA9UHW6 222 aaKnown RBP12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 SHISA9B4DS77 424 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 SEC14L5O43304 696 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 RAMP1O60894 148 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 UGT2B11O75310 529 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 TGFAP01135 160 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 CT62P0C5K7 136 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 SLC35E2BP0CK96 405 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 SLC35E2P0CK97 266 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 CREB1P16220 341 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 GPX3P22352 226 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 ADH6P28332 368 aa12.37□□□□□ -0.43
NKX3-1-202ENST00000523261 GABRB3P28472 473 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms