RNA–Protein interactions for RNA: ENST00000522468.1

HMBOX1-209, Transcript of homeobox containing 1, humanhuman

TSL 3

Gene HMBOX1, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-209ENST00000522468 ZNF225Q9UK10 706 aa12.86□□□□□ -0.35
HMBOX1-209ENST00000522468 TMCO1Q9UM00 188 aa12.86□□□□□ -0.35
HMBOX1-209ENST00000522468 PCDHA9Q9Y5H5 950 aa12.86□□□□□ -0.35
HMBOX1-209ENST00000522468 NSD1Q96L73 2696 aaPredicted RBP12.86□□□□□ -0.35
HMBOX1-209ENST00000522468 MED12LQ86YW9 2145 aa12.86□□□□□ -0.35
HMBOX1-209ENST00000522468 NAV3Q8IVL0 2385 aa12.86□□□□□ -0.35
HMBOX1-209ENST00000522468 C15orf38-AP3S2A0A0A6YYH1 394 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 PPP6CO00743 305 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 DVL2O14641 736 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 KRT38O76015 456 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 ATP1B1P05026 303 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 RBP1P09455 135 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 PORP16435 677 aaPredicted RBP12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 NAGAP17050 411 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 BMP5P22003 454 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 GCAP28676 217 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 PTPN6P29350 595 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 PEX19P40855 299 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 PTGDSP41222 190 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 KIR2DL3P43628 341 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 ASCL1P50553 236 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 DUSP2Q05923 314 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 MAP4K2Q12851 820 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 CEP85LQ5SZL2 805 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 FAM219BQ5XKK7 198 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 NSUN5P2Q63ZY6 315 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 TIGD3Q6B0B8 471 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 DESI1Q6ICB0 168 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 RPS27LQ71UM5 84 aaKnown RBP12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 TAOK1Q7L7X3 1001 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 COMMD6Q7Z4G1 85 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 PACS2Q86VP3 889 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 PRR22Q8IZ63 422 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 MMP21Q8N119 569 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 OR4F6Q8NGB9 312 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 EPS8L3Q8TE67 593 aaKnown RBP12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 ZNF483Q8TF39 744 aaPredicted RBP12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 RNASE6Q93091 150 aaKnown RBP12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 HGDQ93099 445 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 WDYHV1Q96HA8 205 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 TMEM109Q9BVC6 243 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 UGT2B28Q9BY64 529 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 FARSBQ9NSD9 589 aaKnown RBP12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 MAT2BQ9NZL9 334 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 TBK1Q9UHD2 729 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 ST6GALNAC2Q9UJ37 374 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 SLC6A5Q9Y345 797 aa12.85□□□□□ -0.35
HMBOX1-209ENST00000522468 C1orf226A1L170 272 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 MBD3L4A6NDZ8 208 aaPredicted RBP12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 MBD3L3A6NE82 208 aaPredicted RBP12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 MBD3L5A6NJ08 208 aaPredicted RBP12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 CD8B2A6NJW9 211 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 CDH16O75309 829 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 PPM1BO75688 479 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 TRAPPC6AO75865 159 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 CBX7O95931 251 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 COL6A2P12110 1019 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 BMP7P18075 431 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 UQCRC1P31930 480 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 NAGLUP54802 743 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 NRG3P56975 720 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 ZNF844Q08AG5 666 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 KRTAP21-3Q3LHN1 58 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 KRT71Q3SY84 523 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 FLYWCH1Q4VC44 716 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 EIPR1Q53HC9 387 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 CCNYL2Q5T2Q4 361 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 HLA-DQA1Q5Y7H0 255 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 LETMD1Q6P1Q0 360 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 FAM111BQ6SJ93 734 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 PAGE2Q7Z2X7 111 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 CROCCP2Q86T23 111 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 TDRPQ86YL5 185 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 PM20D2Q8IYS1 436 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 VWA5B2Q8N398 1253 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 MBD3L2Q8NHZ7 208 aaPredicted RBP12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 ATP6V1E2Q96A05 226 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 ZBTB9Q96C00 473 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 TM4SF18Q96CE8 201 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 ZNF681Q96N22 645 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 GPATCH1Q9BRR8 931 aaKnown RBP12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 POLDIP3Q9BY77 421 aaKnown RBP12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 CLEC4MQ9H2X3 399 aaPredicted RBP12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 VIPAS39Q9H9C1 493 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 BRF2Q9HAW0 419 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 AHSPQ9NZD4 102 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 JKAMPQ9P055 326 aa12.84□□□□□ -0.35
HMBOX1-209ENST00000522468 A6NNC1 897 aa12.83□□□□□ -0.36
HMBOX1-209ENST00000522468 PDYNP01213 254 aa12.83□□□□□ -0.36
HMBOX1-209ENST00000522468 SNRPAP09012 282 aaKnown RBP12.83□□□□□ -0.36
HMBOX1-209ENST00000522468 NT5EP21589 574 aa12.83□□□□□ -0.36
HMBOX1-209ENST00000522468 CNTFP26441 200 aa12.83□□□□□ -0.36
HMBOX1-209ENST00000522468 MASP1P48740 699 aa12.83□□□□□ -0.36
HMBOX1-209ENST00000522468 MAPK12P53778 367 aa12.83□□□□□ -0.36
HMBOX1-209ENST00000522468 IFT88Q13099 833 aa12.83□□□□□ -0.36
HMBOX1-209ENST00000522468 EXOSC7Q15024 291 aaKnown RBP12.83□□□□□ -0.36
HMBOX1-209ENST00000522468 DAZAP2Q15038 168 aaPredicted RBP12.83□□□□□ -0.36
HMBOX1-209ENST00000522468 RASA2Q15283 850 aa12.83□□□□□ -0.36
HMBOX1-209ENST00000522468 TSNAXIP1Q2TAA8 658 aa12.83□□□□□ -0.36
HMBOX1-209ENST00000522468 WIPI1Q5MNZ9 446 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms