RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 GK5Q6ZS86 529 aa7.36□□□□□ -1.23
PVT1-213ENST00000522414 ZNF572Q7Z3I7 529 aaPredicted RBP7.36□□□□□ -1.23
PVT1-213ENST00000522414 FAM13CQ8NE31 585 aa7.36□□□□□ -1.23
PVT1-213ENST00000522414 NUBPLQ8TB37 319 aa7.36□□□□□ -1.23
PVT1-213ENST00000522414 UBTD2Q8WUN7 234 aa7.36□□□□□ -1.23
PVT1-213ENST00000522414 FBXL20Q96IG2 436 aa7.36□□□□□ -1.23
PVT1-213ENST00000522414 DMRTB1Q96MA1 342 aa7.36□□□□□ -1.23
PVT1-213ENST00000522414 GAL3ST4Q96RP7 486 aa7.36□□□□□ -1.23
PVT1-213ENST00000522414 ZNF717Q9BY31 904 aaPredicted RBP7.36□□□□□ -1.23
PVT1-213ENST00000522414 IPPKQ9H8X2 491 aa7.36□□□□□ -1.23
PVT1-213ENST00000522414 SH2D2AQ9NP31 389 aa7.36□□□□□ -1.23
PVT1-213ENST00000522414 UTP11Q9Y3A2 253 aaKnown RBP7.36□□□□□ -1.23
PVT1-213ENST00000522414 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.36□□□□□ -1.23
PVT1-213ENST00000522414 PHF3Q92576 2039 aaKnown RBP7.35□□□□□ -1.23
PVT1-213ENST00000522414 MED12Q93074 2177 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 A0A096LPK6 155 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 A0A0A6YYD5 115 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 CCDC189A1A4V9 331 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 KDM4EB2RXH2 506 aaPredicted RBP7.35□□□□□ -1.23
PVT1-213ENST00000522414 H0YIV9 168 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 OR7A17O14581 309 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 BCKDKO14874 412 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 KLK8O60259 260 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 ACSL3O95573 720 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 CLPSP04118 112 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 KLK1P06870 262 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 SERPINB3P29508 390 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 TLX1P31314 330 aaPredicted RBP7.35□□□□□ -1.23
PVT1-213ENST00000522414 ZFP36L2P47974 494 aaKnown RBP7.35□□□□□ -1.23
PVT1-213ENST00000522414 SLC37A1P57057 533 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 TNFRSF17Q02223 184 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 CAV1Q03135 178 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 BIKQ13323 160 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 GTF2H2Q13888 395 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 ACAP2Q15057 778 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 FAM83EQ2M2I3 478 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 WLSQ5T9L3 541 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 LIPJQ5W064 366 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 BICRALQ6AI39 1079 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 MRM1Q6IN84 353 aaKnown RBP7.35□□□□□ -1.23
PVT1-213ENST00000522414 GTF2H2CQ6P1K8 395 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 CYP20A1Q6UW02 462 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 SYT10Q6XYQ8 523 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 SEM1Q6ZVN7 128 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 GOLGA7Q7Z5G4 137 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 ST13P4Q8IZP2 240 aaPredicted RBP7.35□□□□□ -1.23
PVT1-213ENST00000522414 ZCCHC7Q8N3Z6 543 aaKnown RBP7.35□□□□□ -1.23
PVT1-213ENST00000522414 RHEBL1Q8TAI7 183 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 SLC22A8Q8TCC7 542 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 PAQR8Q8TEZ7 354 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 SPACA9Q96E40 222 aaPredicted RBP7.35□□□□□ -1.23
PVT1-213ENST00000522414 GNRHR2Q96P88 292 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 ZNF559Q9BR84 538 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 LRRC1Q9BTT6 524 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 WWTR1Q9GZV5 400 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 VPS11Q9H270 941 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 SLC6A15Q9H2J7 730 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 LIME1Q9H400 295 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 NOL11Q9H8H0 719 aaKnown RBP7.35□□□□□ -1.23
PVT1-213ENST00000522414 DDX31Q9H8H2 851 aaKnown RBP7.35□□□□□ -1.23
PVT1-213ENST00000522414 SNX15Q9NRS6 342 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 MS4A12Q9NXJ0 267 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 CPSF2Q9P2I0 782 aaKnown RBP7.35□□□□□ -1.23
PVT1-213ENST00000522414 PHF11Q9UIL8 331 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 TSC22D4Q9Y3Q8 395 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 CHCHD2Q9Y6H1 151 aaPredicted RBP7.35□□□□□ -1.23
PVT1-213ENST00000522414 ABCA4P78363 2273 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 NCKAP5O14513 1909 aa7.35□□□□□ -1.23
PVT1-213ENST00000522414 A0A087X1B8 175 aa7.34□□□□□ -1.23
PVT1-213ENST00000522414 A0A1B0GTL3 188 aa7.34□□□□□ -1.23
PVT1-213ENST00000522414 C2orf92A0A1B0GVN3 265 aa7.34□□□□□ -1.23
PVT1-213ENST00000522414 LRRC3CA6NJW4 275 aa7.34□□□□□ -1.23
PVT1-213ENST00000522414 SYCE1LA8MT33 242 aa7.34□□□□□ -1.23
PVT1-213ENST00000522414 PPP6CO00743 305 aa7.34□□□□□ -1.23
PVT1-213ENST00000522414 TRAPPC6AO75865 159 aa7.34□□□□□ -1.23
PVT1-213ENST00000522414 KLHL2O95198 593 aa7.34□□□□□ -1.23
PVT1-213ENST00000522414 AIFM1O95831 613 aa7.34□□□□□ -1.23
PVT1-213ENST00000522414 ALDOAP04075 364 aaKnown RBP7.34□□□□□ -1.23
PVT1-213ENST00000522414 CT62P0C5K7 136 aa7.34□□□□□ -1.23
PVT1-213ENST00000522414 SLC35E2P0CK97 266 aa7.34□□□□□ -1.23
PVT1-213ENST00000522414 TSPAN8P19075 237 aa7.34□□□□□ -1.23
PVT1-213ENST00000522414 TYK2P29597 1187 aa7.34□□□□□ -1.23
PVT1-213ENST00000522414 SERPINB1P30740 379 aa7.34□□□□□ -1.23
PVT1-213ENST00000522414 STX2P32856 288 aa7.34□□□□□ -1.23
PVT1-213ENST00000522414 XKP51811 444 aa7.34□□□□□ -1.23
PVT1-213ENST00000522414 ALDH18A1P54886 795 aaKnown RBP7.34□□□□□ -1.23
PVT1-213ENST00000522414 FBXW4P57775 412 aa7.34□□□□□ -1.23
PVT1-213ENST00000522414 ETF1P62495 437 aaKnown RBP7.34□□□□□ -1.23
PVT1-213ENST00000522414 PLIN5Q00G26 463 aa7.34□□□□□ -1.23
PVT1-213ENST00000522414 MYBPHQ13203 477 aa7.34□□□□□ -1.23
PVT1-213ENST00000522414 CUL3Q13618 768 aa7.34□□□□□ -1.23
PVT1-213ENST00000522414 PCBP2Q15366 365 aaKnown RBP eCLIP7.34□□□□□ -1.23
PVT1-213ENST00000522414 C1orf185Q5T7R7 199 aa7.34□□□□□ -1.23
PVT1-213ENST00000522414 CES4AQ5XG92 561 aa7.34□□□□□ -1.23
PVT1-213ENST00000522414 ARSKQ6UWY0 536 aa7.34□□□□□ -1.23
PVT1-213ENST00000522414 SPNS3Q6ZMD2 512 aa7.34□□□□□ -1.23
PVT1-213ENST00000522414 RNF111Q6ZNA4 994 aa7.34□□□□□ -1.23
PVT1-213ENST00000522414 RPS27LQ71UM5 84 aaKnown RBP7.34□□□□□ -1.23
PVT1-213ENST00000522414 SLC29A4Q7RTT9 530 aa7.34□□□□□ -1.23
PVT1-213ENST00000522414 WDR53Q7Z5U6 358 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms