RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 MSX1P28360 303 aa18.95■□□□□ 0.62
SDCBP-209ENST00000522243 FOXA1P55317 472 aa18.95■□□□□ 0.62
SDCBP-209ENST00000522243 RPP38P78345 283 aaKnown RBP18.95■□□□□ 0.62
SDCBP-209ENST00000522243 ACSM2AQ08AH3 577 aa18.95■□□□□ 0.62
SDCBP-209ENST00000522243 LCP2Q13094 533 aa18.95■□□□□ 0.62
SDCBP-209ENST00000522243 ACSM2BQ68CK6 577 aa18.95■□□□□ 0.62
SDCBP-209ENST00000522243 PACS2Q86VP3 889 aa18.95■□□□□ 0.62
SDCBP-209ENST00000522243 C16orf78Q8WTQ4 265 aa18.95■□□□□ 0.62
SDCBP-209ENST00000522243 CTHRC1Q96CG8 243 aa18.95■□□□□ 0.62
SDCBP-209ENST00000522243 OMA1Q96E52 524 aa18.95■□□□□ 0.62
SDCBP-209ENST00000522243 LCORQ96JN0 433 aaPredicted RBP18.95■□□□□ 0.62
SDCBP-209ENST00000522243 NODALQ96S42 347 aa18.95■□□□□ 0.62
SDCBP-209ENST00000522243 SECISBP2Q96T21 854 aaKnown RBP18.95■□□□□ 0.62
SDCBP-209ENST00000522243 EHD3Q9NZN3 535 aa18.95■□□□□ 0.62
SDCBP-209ENST00000522243 SLC6A5Q9Y345 797 aa18.95■□□□□ 0.62
SDCBP-209ENST00000522243 C2orf72A6NCS6 295 aa18.94■□□□□ 0.62
SDCBP-209ENST00000522243 G3V2L1 256 aa18.94■□□□□ 0.62
SDCBP-209ENST00000522243 GLRA3O75311 464 aa18.94■□□□□ 0.62
SDCBP-209ENST00000522243 ENO1P06733 434 aaKnown RBP18.94■□□□□ 0.62
SDCBP-209ENST00000522243 IGFBP2P18065 325 aa18.94■□□□□ 0.62
SDCBP-209ENST00000522243 TIA1P31483 386 aaKnown RBP eCLIP18.94■□□□□ 0.62
SDCBP-209ENST00000522243 SLCO1A2P46721 670 aa18.94■□□□□ 0.62
SDCBP-209ENST00000522243 PKNOX1P55347 436 aa18.94■□□□□ 0.62
SDCBP-209ENST00000522243 PLCXD2Q0VAA5 305 aa18.94■□□□□ 0.62
SDCBP-209ENST00000522243 ULK2Q8IYT8 1036 aa18.94■□□□□ 0.62
SDCBP-209ENST00000522243 GBP7Q8N8V2 638 aaPredicted RBP18.94■□□□□ 0.62
SDCBP-209ENST00000522243 KAT2AQ92830 837 aa18.94■□□□□ 0.62
SDCBP-209ENST00000522243 HGDQ93099 445 aa18.94■□□□□ 0.62
SDCBP-209ENST00000522243 HSPBAP1Q96EW2 488 aa18.94■□□□□ 0.62
SDCBP-209ENST00000522243 METTL7AQ9H8H3 244 aa18.94■□□□□ 0.62
SDCBP-209ENST00000522243 STK38LQ9Y2H1 464 aa18.94■□□□□ 0.62
SDCBP-209ENST00000522243 C15orf41Q9Y2V0 281 aa18.94■□□□□ 0.62
SDCBP-209ENST00000522243 INTS1Q8N201 2190 aaKnown RBP18.93■□□□□ 0.62
SDCBP-209ENST00000522243 FBN2P35556 2912 aa18.93■□□□□ 0.62
SDCBP-209ENST00000522243 SMIM23A6NLE4 172 aa18.93■□□□□ 0.62
SDCBP-209ENST00000522243 KDM4EB2RXH2 506 aaPredicted RBP18.93■□□□□ 0.62
SDCBP-209ENST00000522243 UBFD1O14562 309 aaKnown RBP18.93■□□□□ 0.62
SDCBP-209ENST00000522243 HOXD4P09016 255 aaPredicted RBP18.93■□□□□ 0.62
SDCBP-209ENST00000522243 MYL2P10916 166 aa18.93■□□□□ 0.62
SDCBP-209ENST00000522243 EMDP50402 254 aa18.93■□□□□ 0.62
SDCBP-209ENST00000522243 CDK9P50750 372 aaKnown RBP18.93■□□□□ 0.62
SDCBP-209ENST00000522243 WNT3P56703 355 aa18.93■□□□□ 0.62
SDCBP-209ENST00000522243 CRYZQ08257 329 aaKnown RBP18.93■□□□□ 0.62
SDCBP-209ENST00000522243 EIPR1Q53HC9 387 aa18.93■□□□□ 0.62
SDCBP-209ENST00000522243 SPIN4Q56A73 249 aa18.93■□□□□ 0.62
SDCBP-209ENST00000522243 ZNF628Q5EBL2 1059 aa18.93■□□□□ 0.62
SDCBP-209ENST00000522243 SPDYAQ5MJ70 313 aa18.93■□□□□ 0.62
SDCBP-209ENST00000522243 WIPI1Q5MNZ9 446 aaPredicted RBP18.93■□□□□ 0.62
SDCBP-209ENST00000522243 ANGPTL8Q6UXH0 198 aa18.93■□□□□ 0.62
SDCBP-209ENST00000522243 SEM1Q6ZVN7 128 aa18.93■□□□□ 0.62
SDCBP-209ENST00000522243 NUP54Q7Z3B4 507 aa18.93■□□□□ 0.62
SDCBP-209ENST00000522243 DMRTC2Q8IXT2 367 aaPredicted RBP18.93■□□□□ 0.62
SDCBP-209ENST00000522243 OR9A2Q8NGT5 310 aa18.93■□□□□ 0.62
SDCBP-209ENST00000522243 CDC26Q8NHZ8 85 aa18.93■□□□□ 0.62
SDCBP-209ENST00000522243 UBLCP1Q8WVY7 318 aaPredicted RBP18.93■□□□□ 0.62
SDCBP-209ENST00000522243 TMEM41AQ96HV5 264 aa18.93■□□□□ 0.62
SDCBP-209ENST00000522243 UBQLN3Q9H347 655 aa18.93■□□□□ 0.62
SDCBP-209ENST00000522243 MCCC2Q9HCC0 563 aa18.93■□□□□ 0.62
SDCBP-209ENST00000522243 PRODH2Q9UF12 536 aa18.93■□□□□ 0.62
SDCBP-209ENST00000522243 MYO9AB2RTY4 2548 aa18.93■□□□□ 0.62
SDCBP-209ENST00000522243 UGT2B11O75310 529 aa18.92■□□□□ 0.62
SDCBP-209ENST00000522243 HPNP05981 417 aa18.92■□□□□ 0.62
SDCBP-209ENST00000522243 DRD2P14416 443 aa18.92■□□□□ 0.62
SDCBP-209ENST00000522243 NAGAP17050 411 aa18.92■□□□□ 0.62
SDCBP-209ENST00000522243 PTGDSP41222 190 aa18.92■□□□□ 0.62
SDCBP-209ENST00000522243 ZYG11AQ6WRX3 759 aa18.92■□□□□ 0.62
SDCBP-209ENST00000522243 WDR53Q7Z5U6 358 aaPredicted RBP18.92■□□□□ 0.62
SDCBP-209ENST00000522243 OR1J4Q8NGS1 313 aa18.92■□□□□ 0.62
SDCBP-209ENST00000522243 TRIM44Q96DX7 344 aaPredicted RBP18.92■□□□□ 0.62
SDCBP-209ENST00000522243 TIMP4Q99727 224 aa18.92■□□□□ 0.62
SDCBP-209ENST00000522243 OSBPL11Q9BXB4 747 aa18.92■□□□□ 0.62
SDCBP-209ENST00000522243 C12orf65Q9H3J6 166 aaKnown RBP18.92■□□□□ 0.62
SDCBP-209ENST00000522243 GALNT9Q9HCQ5 603 aa18.92■□□□□ 0.62
SDCBP-209ENST00000522243 APCP25054 2843 aa18.92■□□□□ 0.62
SDCBP-209ENST00000522243 CCDC151A5D8V7 595 aa18.91■□□□□ 0.62
SDCBP-209ENST00000522243 ICOSLGO75144 302 aa18.91■□□□□ 0.62
SDCBP-209ENST00000522243 PROCP04070 461 aa18.91■□□□□ 0.62
SDCBP-209ENST00000522243 ANXA4P09525 319 aaPredicted RBP18.91■□□□□ 0.62
SDCBP-209ENST00000522243 DRD5P21918 477 aa18.91■□□□□ 0.62
SDCBP-209ENST00000522243 PTPN6P29350 595 aa18.91■□□□□ 0.62
SDCBP-209ENST00000522243 PPICP45877 212 aa18.91■□□□□ 0.62
SDCBP-209ENST00000522243 DCAF7P61962 342 aa18.91■□□□□ 0.62
SDCBP-209ENST00000522243 HEPACAMQ14CZ8 416 aa18.91■□□□□ 0.62
SDCBP-209ENST00000522243 RIPPLY2Q5TAB7 128 aa18.91■□□□□ 0.62
SDCBP-209ENST00000522243 TIGD3Q6B0B8 471 aa18.91■□□□□ 0.62
SDCBP-209ENST00000522243 SH2D5Q6ZV89 423 aa18.91■□□□□ 0.62
SDCBP-209ENST00000522243 YRDCQ86U90 279 aaKnown RBP18.91■□□□□ 0.62
SDCBP-209ENST00000522243 ZNF675Q8TD23 568 aa18.91■□□□□ 0.62
SDCBP-209ENST00000522243 TMBIM1Q969X1 311 aa18.91■□□□□ 0.62
SDCBP-209ENST00000522243 NTNG2Q96CW9 530 aa18.91■□□□□ 0.62
SDCBP-209ENST00000522243 CCDC126Q96EE4 140 aa18.91■□□□□ 0.62
SDCBP-209ENST00000522243 SLC35C2Q9NQQ7 365 aa18.91■□□□□ 0.62
SDCBP-209ENST00000522243 GIMAP4Q9NUV9 329 aa18.91■□□□□ 0.62
SDCBP-209ENST00000522243 KLRF1Q9NZS2 232 aa18.91■□□□□ 0.62
SDCBP-209ENST00000522243 CAMK2AQ9UQM7 478 aa18.91■□□□□ 0.62
SDCBP-209ENST00000522243 PCDHGB3Q9Y5G1 929 aa18.91■□□□□ 0.62
SDCBP-209ENST00000522243 ABCA12Q86UK0 2595 aa18.91■□□□□ 0.62
SDCBP-209ENST00000522243 KIAA1549Q9HCM3 1950 aa18.91■□□□□ 0.62
SDCBP-209ENST00000522243 FRG2CA6NGY1 282 aa18.9■□□□□ 0.62
SDCBP-209ENST00000522243 AHRRA9YTQ3 701 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms