RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 NOP16Q9Y3C1 178 aaKnown RBP13.13□□□□□ -0.31
SYNPO-205ENST00000522122 OR2B3O76000 313 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 ANXA3P12429 323 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 IL7P13232 177 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 HSD11B1P28845 292 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 GJA5P36382 358 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 MAPK14Q16539 360 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 EIF5AL1Q6IS14 154 aaKnown RBP13.13□□□□□ -0.31
SYNPO-205ENST00000522122 SPATC1Q76KD6 591 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 RHOXF1Q8NHV9 184 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 SCGB3A2Q96PL1 93 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 POLDIP3Q9BY77 421 aaKnown RBP13.13□□□□□ -0.31
SYNPO-205ENST00000522122 OR8D2Q9GZM6 311 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 TP63Q9H3D4 680 aaPredicted RBP13.13□□□□□ -0.31
SYNPO-205ENST00000522122 SDK1Q7Z5N4 2213 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 CD8B2A6NJW9 211 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 NPIPA5E9PKD4 350 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 PLD2O14939 933 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 CSTAP01040 98 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 CD8BP10966 210 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 PTGS2P35354 604 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 RGRP47804 291 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 SLC9B2Q86UD5 537 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 RIMKLAQ8IXN7 391 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 OR6N2Q8NGY6 317 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 FCAMRQ8WWV6 532 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 HS6ST2Q96MM7 605 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 SCP2D1Q9UJQ7 156 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 NPIPA1Q9UND3 350 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 IGLON5A6NGN9 336 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 M0R233 179 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 PCDH17O14917 1159 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 MUSKO15146 869 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 CDK1P06493 297 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 GNG2P59768 71 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 TBCEQ15813 527 aaPredicted RBP13.13□□□□□ -0.31
SYNPO-205ENST00000522122 AAK1Q2M2I8 961 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 SLC25A25Q6KCM7 469 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 C17orf99Q6UX52 265 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 DLEU7Q6UYE1 221 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 KLHL42Q9P2K6 505 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 MAFFQ9ULX9 164 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 MAB21L2Q9Y586 359 aa13.13□□□□□ -0.31
SYNPO-205ENST00000522122 IGLV3-10A0A075B6K4 115 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 A0A1W2PPK0 400 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 HNRNPA1P09651 372 aaKnown RBP eCLIP13.12□□□□□ -0.31
SYNPO-205ENST00000522122 ACVR1BP36896 505 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 GPR4P46093 362 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 SNTB2Q13425 540 aaKnown RBP13.12□□□□□ -0.31
SYNPO-205ENST00000522122 SPAG16Q8N0X2 631 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 SPERTQ8NA61 448 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 ACOT12Q8WYK0 555 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 GTPBP2Q9BX10 602 aaKnown RBP13.12□□□□□ -0.31
SYNPO-205ENST00000522122 A0A0G2JPF8 293 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 HNRNPCL3B7ZW38 293 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 RNASET2O00584 256 aaKnown RBP13.12□□□□□ -0.31
SYNPO-205ENST00000522122 PPM1BO75688 479 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 HNRNPCL4P0DMR1 293 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 SYN1P17600 705 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 CBLP22681 906 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 NAA10P41227 235 aaPredicted RBP13.12□□□□□ -0.31
SYNPO-205ENST00000522122 RAB28P51157 221 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 EOGTQ5NDL2 527 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 DESI1Q6ICB0 168 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 METTL2AQ96IZ6 378 aaKnown RBP13.12□□□□□ -0.31
SYNPO-205ENST00000522122 C1QTNF3Q9BXJ4 246 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 MLXQ9UH92 298 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 PCDHGB2Q9Y5G2 931 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 C2orf74A8MZ97 194 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 GPR39O43194 453 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 SULT1C4O75897 302 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 SLC6A9P48067 706 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 PRKCDQ05655 676 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 RPA4Q13156 261 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 FAM180BQ6P0A1 224 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 CBLL1Q75N03 491 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 KLHDC8AQ8IYD2 350 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 TCEAL8Q8IYN2 117 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 OR8K3Q8NH51 312 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 EGLN2Q96KS0 407 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 SMIM14Q96QK8 99 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 PRODH2Q9UF12 536 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 TNFRSF10BO14763 440 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 RBBP9O75884 186 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 SNAPC5O75971 98 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 CD1EP15812 388 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 PIGAP37287 484 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 VSX2P58304 361 aaPredicted RBP13.12□□□□□ -0.31
SYNPO-205ENST00000522122 UBXN2BQ14CS0 331 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.12□□□□□ -0.31
SYNPO-205ENST00000522122 MS4A15Q8N5U1 240 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 ASIC5Q9NY37 505 aa13.12□□□□□ -0.31
SYNPO-205ENST00000522122 SOX30O94993 753 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 DAPP51397 102 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 NDUFAF5Q5TEU4 345 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 FAM217AQ8IXS0 508 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 HIST1H2AAQ96QV6 131 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 G6PC3Q9BUM1 346 aa13.11□□□□□ -0.31
SYNPO-205ENST00000522122 RANBP3Q9H6Z4 567 aaPredicted RBP13.11□□□□□ -0.31
SYNPO-205ENST00000522122 METTL8Q9H825 291 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms