RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 CTHRC1Q96CG8 243 aa16.9■□□□□ 0.3
TOP1MT-216ENST00000522121 L3HYPDHQ96EM0 354 aa16.9■□□□□ 0.3
TOP1MT-216ENST00000522121 CNRIP1Q96F85 164 aaPredicted RBP16.9■□□□□ 0.3
TOP1MT-216ENST00000522121 TIMP4Q99727 224 aa16.9■□□□□ 0.3
TOP1MT-216ENST00000522121 UBQLN3Q9H347 655 aa16.9■□□□□ 0.3
TOP1MT-216ENST00000522121 DCDC2Q9UHG0 476 aa16.9■□□□□ 0.3
TOP1MT-216ENST00000522121 DLGAP4Q9Y2H0 992 aa16.9■□□□□ 0.3
TOP1MT-216ENST00000522121 PLLPQ9Y342 182 aa16.9■□□□□ 0.3
TOP1MT-216ENST00000522121 PHF3Q92576 2039 aaKnown RBP16.9■□□□□ 0.3
TOP1MT-216ENST00000522121 DNAJC13O75165 2243 aa16.9■□□□□ 0.3
TOP1MT-216ENST00000522121 GNB5O14775 395 aa16.89■□□□□ 0.29
TOP1MT-216ENST00000522121 PCDH7O60245 1069 aa16.89■□□□□ 0.29
TOP1MT-216ENST00000522121 BCAS2O75934 225 aaPredicted RBP16.89■□□□□ 0.29
TOP1MT-216ENST00000522121 CBX7O95931 251 aa16.89■□□□□ 0.29
TOP1MT-216ENST00000522121 IL3P08700 152 aa16.89■□□□□ 0.29
TOP1MT-216ENST00000522121 RHOXF2BP0C7M4 288 aa16.89■□□□□ 0.29
TOP1MT-216ENST00000522121 PYGBP11216 843 aa16.89■□□□□ 0.29
TOP1MT-216ENST00000522121 DRD5P21918 477 aa16.89■□□□□ 0.29
TOP1MT-216ENST00000522121 PPICP45877 212 aa16.89■□□□□ 0.29
TOP1MT-216ENST00000522121 CRYZQ08257 329 aaKnown RBP16.89■□□□□ 0.29
TOP1MT-216ENST00000522121 HEPACAMQ14CZ8 416 aa16.89■□□□□ 0.29
TOP1MT-216ENST00000522121 TRMT12Q53H54 448 aaKnown RBP16.89■□□□□ 0.29
TOP1MT-216ENST00000522121 FNDC7Q5VTL7 733 aa16.89■□□□□ 0.29
TOP1MT-216ENST00000522121 TIGD3Q6B0B8 471 aa16.89■□□□□ 0.29
TOP1MT-216ENST00000522121 SLC30A6Q6NXT4 461 aa16.89■□□□□ 0.29
TOP1MT-216ENST00000522121 FAM180BQ6P0A1 224 aa16.89■□□□□ 0.29
TOP1MT-216ENST00000522121 LIX1LQ8IVB5 337 aa16.89■□□□□ 0.29
TOP1MT-216ENST00000522121 OR1J4Q8NGS1 313 aa16.89■□□□□ 0.29
TOP1MT-216ENST00000522121 OMA1Q96E52 524 aa16.89■□□□□ 0.29
TOP1MT-216ENST00000522121 CCDC126Q96EE4 140 aa16.89■□□□□ 0.29
TOP1MT-216ENST00000522121 ZNF681Q96N22 645 aa16.89■□□□□ 0.29
TOP1MT-216ENST00000522121 RHOXF2Q9BQY4 288 aa16.89■□□□□ 0.29
TOP1MT-216ENST00000522121 ACPTQ9BZG2 426 aa16.89■□□□□ 0.29
TOP1MT-216ENST00000522121 GIMAP4Q9NUV9 329 aa16.89■□□□□ 0.29
TOP1MT-216ENST00000522121 TBK1Q9UHD2 729 aa16.89■□□□□ 0.29
TOP1MT-216ENST00000522121 EPPINO95925 133 aa16.88■□□□□ 0.29
TOP1MT-216ENST00000522121 FAM153BP0C7A2 387 aa16.88■□□□□ 0.29
TOP1MT-216ENST00000522121 CHN1P15882 459 aa16.88■□□□□ 0.29
TOP1MT-216ENST00000522121 PCSK2P16519 638 aa16.88■□□□□ 0.29
TOP1MT-216ENST00000522121 GCKP35557 465 aa16.88■□□□□ 0.29
TOP1MT-216ENST00000522121 DUSP2Q05923 314 aa16.88■□□□□ 0.29
TOP1MT-216ENST00000522121 SNTA1Q13424 505 aa16.88■□□□□ 0.29
TOP1MT-216ENST00000522121 LTB4RQ15722 352 aa16.88■□□□□ 0.29
TOP1MT-216ENST00000522121 ERCC6LQ2NKX8 1250 aa16.88■□□□□ 0.29
TOP1MT-216ENST00000522121 FAM153CQ494X1 144 aa16.88■□□□□ 0.29
TOP1MT-216ENST00000522121 FAM219BQ5XKK7 198 aa16.88■□□□□ 0.29
TOP1MT-216ENST00000522121 VASNQ6EMK4 673 aa16.88■□□□□ 0.29
TOP1MT-216ENST00000522121 TMEM81Q6P7N7 255 aa16.88■□□□□ 0.29
TOP1MT-216ENST00000522121 ANGPTL8Q6UXH0 198 aa16.88■□□□□ 0.29
TOP1MT-216ENST00000522121 LACC1Q8IV20 430 aa16.88■□□□□ 0.29
TOP1MT-216ENST00000522121 CCDC116Q8IYX3 515 aa16.88■□□□□ 0.29
TOP1MT-216ENST00000522121 ZNF675Q8TD23 568 aa16.88■□□□□ 0.29
TOP1MT-216ENST00000522121 ERP27Q96DN0 273 aa16.88■□□□□ 0.29
TOP1MT-216ENST00000522121 LRRC46Q96FV0 321 aa16.88■□□□□ 0.29
TOP1MT-216ENST00000522121 OSBPL11Q9BXB4 747 aa16.88■□□□□ 0.29
TOP1MT-216ENST00000522121 KLRF1Q9NZS2 232 aa16.88■□□□□ 0.29
TOP1MT-216ENST00000522121 HEY2Q9UBP5 337 aa16.88■□□□□ 0.29
TOP1MT-216ENST00000522121 CAMK2AQ9UQM7 478 aa16.88■□□□□ 0.29
TOP1MT-216ENST00000522121 TACC2O95359 2948 aa16.87■□□□□ 0.29
TOP1MT-216ENST00000522121 FRG2CA6NGY1 282 aa16.87■□□□□ 0.29
TOP1MT-216ENST00000522121 DVL2O14641 736 aa16.87■□□□□ 0.29
TOP1MT-216ENST00000522121 IL2RAP01589 272 aa16.87■□□□□ 0.29
TOP1MT-216ENST00000522121 GSTM5P46439 218 aa16.87■□□□□ 0.29
TOP1MT-216ENST00000522121 EMDP50402 254 aa16.87■□□□□ 0.29
TOP1MT-216ENST00000522121 HTR6P50406 440 aa16.87■□□□□ 0.29
TOP1MT-216ENST00000522121 NAA20P61599 178 aa16.87■□□□□ 0.29
TOP1MT-216ENST00000522121 MRPS35P82673 323 aaKnown RBP16.87■□□□□ 0.29
TOP1MT-216ENST00000522121 HMGCS1Q01581 520 aa16.87■□□□□ 0.29
TOP1MT-216ENST00000522121 ACSF3Q4G176 576 aaPredicted RBP16.87■□□□□ 0.29
TOP1MT-216ENST00000522121 NHSL2Q5HYW2 709 aa16.87■□□□□ 0.29
TOP1MT-216ENST00000522121 TMEM200AQ86VY9 491 aa16.87■□□□□ 0.29
TOP1MT-216ENST00000522121 CCNYL1Q8N7R7 359 aa16.87■□□□□ 0.29
TOP1MT-216ENST00000522121 SIMC1Q8NDZ2 872 aa16.87■□□□□ 0.29
TOP1MT-216ENST00000522121 HGDQ93099 445 aa16.87■□□□□ 0.29
TOP1MT-216ENST00000522121 EXOSC8Q96B26 276 aaKnown RBP16.87■□□□□ 0.29
TOP1MT-216ENST00000522121 TMCO6Q96DC7 493 aa16.87■□□□□ 0.29
TOP1MT-216ENST00000522121 SHCBP1LQ9BZQ2 653 aa16.87■□□□□ 0.29
TOP1MT-216ENST00000522121 PRDM14Q9GZV8 571 aa16.87■□□□□ 0.29
TOP1MT-216ENST00000522121 SLC6A5Q9Y345 797 aa16.87■□□□□ 0.29
TOP1MT-216ENST00000522121 TIMM22Q9Y584 194 aa16.87■□□□□ 0.29
TOP1MT-216ENST00000522121 TO15178 435 aa16.86■□□□□ 0.29
TOP1MT-216ENST00000522121 ICOSLGO75144 302 aa16.86■□□□□ 0.29
TOP1MT-216ENST00000522121 GLRA3O75311 464 aa16.86■□□□□ 0.29
TOP1MT-216ENST00000522121 ZWINTO95229 277 aa16.86■□□□□ 0.29
TOP1MT-216ENST00000522121 ANXA4P09525 319 aaPredicted RBP16.86■□□□□ 0.29
TOP1MT-216ENST00000522121 MYL2P10916 166 aa16.86■□□□□ 0.29
TOP1MT-216ENST00000522121 POU3F2P20265 443 aaPredicted RBP16.86■□□□□ 0.29
TOP1MT-216ENST00000522121 PTPN6P29350 595 aa16.86■□□□□ 0.29
TOP1MT-216ENST00000522121 TIA1P31483 386 aaKnown RBP eCLIP16.86■□□□□ 0.29
TOP1MT-216ENST00000522121 MPIP34949 423 aa16.86■□□□□ 0.29
TOP1MT-216ENST00000522121 TIMP3P35625 211 aa16.86■□□□□ 0.29
TOP1MT-216ENST00000522121 SOX18P35713 384 aa16.86■□□□□ 0.29
TOP1MT-216ENST00000522121 KRT20P35900 424 aa16.86■□□□□ 0.29
TOP1MT-216ENST00000522121 PEX19P40855 299 aa16.86■□□□□ 0.29
TOP1MT-216ENST00000522121 PSPHP78330 225 aa16.86■□□□□ 0.29
TOP1MT-216ENST00000522121 RAE1P78406 368 aaKnown RBP16.86■□□□□ 0.29
TOP1MT-216ENST00000522121 BTKQ06187 659 aa16.86■□□□□ 0.29
TOP1MT-216ENST00000522121 EIPR1Q53HC9 387 aa16.86■□□□□ 0.29
TOP1MT-216ENST00000522121 ZNF628Q5EBL2 1059 aa16.86■□□□□ 0.29
TOP1MT-216ENST00000522121 SPDYAQ5MJ70 313 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms