RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 PRKACBP22694 351 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 RPS3AP61247 264 aaKnown RBP15.39■□□□□ 0.05
USP42-207ENST00000521713 NR0B2Q15466 257 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 KIAA0895LQ68EN5 471 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 CCSAPQ6IQ19 270 aaPredicted RBP15.39■□□□□ 0.05
USP42-207ENST00000521713 GALNTL5Q7Z4T8 443 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 ZNF227Q86WZ6 799 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 CARM1Q86X55 608 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 PIANPQ8IYJ0 282 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 Q8N402 240 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 KRTCAP2Q8N6L1 136 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 OR56A3Q8NH54 315 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 TMED9Q9BVK6 235 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 EXTL2Q9UBQ6 330 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 SIT1Q9Y3P8 196 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 FARS2O95363 451 aaKnown RBP15.39■□□□□ 0.05
USP42-207ENST00000521713 MT-ND2P03891 347 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 MT-ND5P03915 603 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 CD63P08962 238 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 PVALBP20472 110 aaPredicted RBP15.39■□□□□ 0.05
USP42-207ENST00000521713 CFL1P23528 166 aaKnown RBP15.39■□□□□ 0.05
USP42-207ENST00000521713 MAP3K8P41279 467 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 MLF2Q15773 248 aaPredicted RBP15.39■□□□□ 0.05
USP42-207ENST00000521713 DCDC5Q6ZRR9 648 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 OR5J2Q8NH18 312 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 SGCDQ92629 289 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 PEX11GQ96HA9 241 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 PFDN5Q99471 154 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 TMEM168Q9H0V1 697 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 WBP1LQ9NX94 342 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 A8MV72 311 aaPredicted RBP15.39■□□□□ 0.05
USP42-207ENST00000521713 PGCP20142 388 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 PDZD9Q8IXQ8 264 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 GHDCQ8N2G8 530 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 PSD4Q8NDX1 1056 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 GNPDA2Q8TDQ7 276 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 RLN3Q8WXF3 142 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 SERINC2Q96SA4 455 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 FAM118AQ9NWS6 357 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 DNAJC15Q9Y5T4 150 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 SNNO75324 88 aaPredicted RBP15.39■□□□□ 0.05
USP42-207ENST00000521713 CASP6P55212 293 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 TAS2R38P59533 333 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 SHC2P98077 582 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 FGL1Q08830 312 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 EIF2S3LQ2VIR3 472 aaKnown RBP15.39■□□□□ 0.05
USP42-207ENST00000521713 DEFB133Q30KQ1 61 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 TMEM173Q86WV6 379 aaPredicted RBP15.39■□□□□ 0.05
USP42-207ENST00000521713 ZSWIM9Q86XI8 627 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 FAM86B1Q8N7N1 296 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 PNLDC1Q8NA58 520 aaKnown RBP15.39■□□□□ 0.05
USP42-207ENST00000521713 TREX1Q9NSU2 369 aa15.39■□□□□ 0.05
USP42-207ENST00000521713 NOP16Q9Y3C1 178 aaKnown RBP15.39■□□□□ 0.05
USP42-207ENST00000521713 MYH9P35579 1960 aaKnown RBP15.39■□□□□ 0.05
USP42-207ENST00000521713 KRBA1A5PL33 1030 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 OR52A4PA6NMU1 304 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 SLC1A7O00341 560 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 POLR1CO15160 346 aaPredicted RBP15.38■□□□□ 0.05
USP42-207ENST00000521713 CDK4P11802 303 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 E2F1Q01094 437 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 ELOAQ14241 798 aaKnown RBP15.38■□□□□ 0.05
USP42-207ENST00000521713 PRSS48Q7RTY5 328 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 COMMD6Q7Z4G1 85 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 OR2A12Q8NGT7 310 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 IGSF5Q9NSI5 407 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 ASB6Q9NWX5 421 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 ERVK-18Q9QC07 812 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 MYH8P13535 1937 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 SCAMP2O15127 329 aaKnown RBP15.38■□□□□ 0.05
USP42-207ENST00000521713 FLRT2O43155 660 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 EEDO75530 441 aaKnown RBP15.38■□□□□ 0.05
USP42-207ENST00000521713 CXCL10P02778 98 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 UGT2B10P36537 528 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 SIM1P81133 766 aaPredicted RBP15.38■□□□□ 0.05
USP42-207ENST00000521713 LHX8Q68G74 356 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 TMEM225Q6GV28 225 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 OR5T3Q8NGG3 340 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 TRIM43Q96BQ3 446 aaPredicted RBP15.38■□□□□ 0.05
USP42-207ENST00000521713 OR51I1Q9H343 314 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 BRF2Q9HAW0 419 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 PRSS38A1L453 326 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 H3BMQ9 156 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 SCO2O43819 266 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 KDELR2P33947 212 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 UGT3A2Q3SY77 523 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 HSDL2Q6YN16 418 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 GDPGP1Q6ZNW5 385 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 ZNF761Q86XN6 746 aaPredicted RBP15.38■□□□□ 0.05
USP42-207ENST00000521713 COQ8AQ8NI60 647 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 KCNN1Q92952 543 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 FKBP10Q96AY3 582 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 COG8Q96MW5 612 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 HOXD1Q9GZZ0 328 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 KATNBL1Q9H079 304 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 TLX2O43763 284 aaPredicted RBP15.38■□□□□ 0.05
USP42-207ENST00000521713 ZNF14P17017 642 aaPredicted RBP15.38■□□□□ 0.05
USP42-207ENST00000521713 GPR143P51810 404 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 PMS2P3Q13401 168 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 UGT2A3Q6UWM9 527 aa15.38■□□□□ 0.05
USP42-207ENST00000521713 TMEM107Q6UX40 140 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms