RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 LYVE1Q9Y5Y7 322 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 ARL5AQ9Y689 179 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 KCNE2Q9Y6J6 123 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 ZNF638Q14966 1978 aaKnown RBP3.01□□□□□ -1.93
VPS13B-209ENST00000521559 DENND4CQ5VZ89 1909 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 MYO16Q9Y6X6 1858 aa3.01□□□□□ -1.93
VPS13B-209ENST00000521559 F5P12259 2224 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 GLYATL1P3A0A0U1RQE8 302 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 CCDC162PA2VCL2 907 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 A6NCN8 305 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 E7ESA3 106 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 PTGES3LE9PB15 166 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 H7C0S8 307 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 CACNB4O00305 520 aaPredicted RBP3□□□□□ -1.93
VPS13B-209ENST00000521559 GAPDHSO14556 408 aaPredicted RBP3□□□□□ -1.93
VPS13B-209ENST00000521559 AP3D1O14617 1153 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 SPINT2O43291 252 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 BUD23O43709 281 aaKnown RBP3□□□□□ -1.93
VPS13B-209ENST00000521559 UGT1A9O60656 530 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 LRP3O75074 770 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 AVILO75366 819 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 NDUFS3O75489 264 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 SLC25A12O75746 678 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 SRP72O76094 671 aaKnown RBP3□□□□□ -1.93
VPS13B-209ENST00000521559 SLU7O95391 586 aaKnown RBP3□□□□□ -1.93
VPS13B-209ENST00000521559 SLC4A1P02730 911 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 PCCBP05166 539 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 RHOXF2BP0C7M4 288 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 ZNF806P0C7X5 589 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 HLA-DOBP13765 273 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 PGAM1P18669 254 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 UGT1A6P19224 532 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 UGT1A1P22309 533 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 UGT1A4P22310 534 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 NMBRP28336 390 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 UGT1A3P35503 534 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 UGT1A5P35504 534 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 TRIM23P36406 574 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 PPARGP37231 505 aaPredicted RBP3□□□□□ -1.93
VPS13B-209ENST00000521559 SPAM1P38567 509 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 HADHAP40939 763 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 ELK3P41970 407 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 GPR1P46091 355 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 CSNK1EP49674 416 aaKnown RBP3□□□□□ -1.93
VPS13B-209ENST00000521559 VEGFCP49767 419 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 C21orf59P57076 290 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 CSNK2A1P68400 391 aaPredicted RBP3□□□□□ -1.93
VPS13B-209ENST00000521559 PRAMEP78395 509 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 IRX4P78413 519 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 CRADDP78560 199 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 XIAPP98170 497 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 CDK3Q00526 305 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 GUCY2DQ02846 1103 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 ACVR1Q04771 509 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 CACNG1Q06432 222 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 PDIA2Q13087 525 aaKnown RBP3□□□□□ -1.93
VPS13B-209ENST00000521559 CALCOCO2Q13137 446 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 CUL1Q13616 776 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 GTF2H2Q13888 395 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 POU6F1Q14863 301 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 IRF4Q15306 451 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 MED22Q15528 200 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 TRADDQ15628 312 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 GPR33Q49SQ1 333 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 ANKRD20A4Q4UJ75 823 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 TMEM35AQ53FP2 167 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 HENMT1Q5T8I9 393 aaKnown RBP3□□□□□ -1.93
VPS13B-209ENST00000521559 ALS2CLQ60I27 953 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 FRG2Q64ET8 278 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 PDPK2PQ6A1A2 396 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 GTF2H2CQ6P1K8 395 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 CASC4Q6P4E1 433 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 IL27RAQ6UWB1 636 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 FAM151BQ6UXP7 276 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 GCNT7Q6ZNI0 430 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 KCTD8Q6ZWB6 473 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 IKBIPQ70UQ0 350 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 CENPUQ71F23 418 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 RABEPKQ7Z6M1 372 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 TMEM135Q86UB9 458 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 IFT20Q8IY31 132 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 PDIK1LQ8N165 341 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 TRAM1L1Q8N609 369 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 EIF1ADQ8N9N8 165 aaKnown RBP3□□□□□ -1.93
VPS13B-209ENST00000521559 GPR26Q8NDV2 337 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 CSNK2A3Q8NEV1 391 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 OR4K2Q8NGD2 314 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 OR13C4Q8NGS5 318 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 BBS10Q8TAM1 723 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 HEXDCQ8WVB3 486 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 GLYATL1Q969I3 302 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 ULK4Q96C45 1275 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 LRRC39Q96DD0 335 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 STAMBPL1Q96FJ0 436 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 COX14Q96I36 57 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 DNAJC1Q96KC8 554 aaKnown RBP3□□□□□ -1.93
VPS13B-209ENST00000521559 ZNF583Q96ND8 569 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 CMKLR1Q99788 373 aa3□□□□□ -1.93
VPS13B-209ENST00000521559 EBNA1BP2Q99848 306 aaKnown RBP3□□□□□ -1.93
VPS13B-209ENST00000521559 RHOXF2Q9BQY4 288 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms