RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 OR3A3P47888 321 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 RAP1GDS1P52306 607 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 SLC18A1P54219 525 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 MTTPP55157 894 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 CLDN17P56750 224 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 OR1D5P58170 312 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 FKBP3Q00688 224 aaKnown RBP2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 APOFQ13790 326 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 SCARB2Q14108 478 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 RCN2Q14257 317 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 SPA17Q15506 151 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 TGFBIQ15582 683 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 ZCWPW2Q504Y3 356 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 CCDC92Q53HC0 331 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 LBHQ53QV2 105 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 FASTKD1Q53R41 847 aaKnown RBP2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 ACSBG2Q5FVE4 666 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 HECTD3Q5T447 861 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 THOC7Q6I9Y2 204 aaKnown RBP2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 C11orf88Q6PI97 169 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 UGT2A3Q6UWM9 527 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 BTNL8Q6UX41 500 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 MACC1Q6ZN28 852 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 ZNF497Q6ZNH5 498 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 TMEM182Q6ZP80 229 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 FAM47EQ6ZV65 393 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 ZER1Q7Z7L7 766 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 LRRC49Q8IUZ0 686 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 APCDD1Q8J025 514 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 SIX6OS1Q8N1H7 587 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 LRTM2Q8N967 370 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 GDAP1Q8TB36 358 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 LRRC15Q8TF66 581 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 CRYGNQ8WXF5 182 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 RIT1Q92963 219 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 DNAJC19Q96DA6 116 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 DGCR14Q96DF8 476 aaKnown RBP2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 CCDC42Q96M95 316 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 INTS14Q96SY0 518 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 RUFY1Q96T51 708 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 ZNF184Q99676 751 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 CCT7Q99832 543 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 MLPHQ9BV36 600 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 RAB34Q9BZG1 259 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 NT5C3AQ9H0P0 336 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 GBA3Q9H227 469 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 CD209Q9NNX6 404 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 SAR1AQ9NR31 198 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 FGFR1OP2Q9NVK5 253 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 HOXC10Q9NYD6 342 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 ASIC3Q9UHC3 531 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 LGALS13Q9UHV8 139 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 PILRBQ9UKJ0 227 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 ITGA11Q9UKX5 1188 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 WIPI2Q9Y4P8 454 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 HEY1Q9Y5J3 304 aa2.8□□□□□ -1.96
HMGB1P41-201ENST00000520234 LOC105371242A0A075B767 164 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 A0A0B4J203 849 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 A0A0J9YWU9 116 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 IQCMA0A1B0GVH7 501 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 A0A1W2PRQ8 180 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 MACROD2A1Z1Q3 448 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 GTPBP10A4D1E9 387 aaKnown RBP2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 MTMR11A4FU01 709 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 TRIM49BA6NDI0 452 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 OOEPA6NGQ2 149 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 TRIM64CA6NLI5 447 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 SURF4O15260 269 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 MAGEB3O15480 346 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 TTI1O43156 1089 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 SUPT3HO75486 399 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 CSDE1O75534 798 aaKnown RBP2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 NOL4O94818 638 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 OR6B1O95007 311 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 RLN1P04808 185 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 ZSCAN5DPP0CG00 497 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 MYOGP15173 224 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 UGT1A4P22310 534 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 RBMS1P29558 406 aaKnown RBP2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 DUTP33316 252 aaKnown RBP2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 HNF4AP41235 474 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 SLC1A4P43007 532 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 MAGEA1P43355 309 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 KLK7P49862 253 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 GPC3P51654 580 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 ADARP55265 1226 aaKnown RBP2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 TMEM50BP56557 158 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 FKBP1AP62942 108 aaKnown RBP2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 IRX4P78413 519 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 ROR1Q01973 937 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 SLC34A1Q06495 639 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 PPIDQ08752 370 aaKnown RBP2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 MSLNQ13421 630 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 TRA2AQ13595 282 aaKnown RBP eCLIP2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 PTK6Q13882 451 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 FASTKD3Q14CZ7 662 aaKnown RBP2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 PPA1Q15181 289 aa2.79□□□□□ -1.96
HMGB1P41-201ENST00000520234 SLC15A2Q16348 729 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms