RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 SRD5A2P31213 254 aa10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 ELK3P41970 407 aa10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 NR1H2P55055 460 aa10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 ATP6V0D1P61421 351 aa10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 PHEXP78562 749 aa10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 MGAT5Q09328 741 aa10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 DDX39BQ13838 428 aaKnown RBP10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 CAPRIN1Q14444 709 aaKnown RBP10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 BCL2A1Q16548 175 aa10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 BEX5Q5H9J7 111 aa10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 STEAP4Q687X5 459 aa10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 VWA1Q6PCB0 445 aa10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 ZNF474Q6S9Z5 364 aaPredicted RBP10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 PLXDC2Q6UX71 529 aa10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 BTLAQ7Z6A9 289 aa10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 TSPAN17Q96FV3 270 aa10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 ZC3HAV1LQ96H79 300 aaKnown RBP10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 SFXN2Q96NB2 322 aa10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 PIGQQ9BRB3 760 aa10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 CD244Q9BZW8 370 aa10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 RHOJQ9H4E5 214 aa10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 GALNT9Q9HCQ5 603 aa10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 ASIC3Q9UHC3 531 aa10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 CHMP2BQ9UQN3 213 aa10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 PPP2R2CQ9Y2T4 447 aa10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 MRPS18CQ9Y3D5 142 aaKnown RBP10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 TSC22D4Q9Y3Q8 395 aa10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 ASB4Q9Y574 426 aa10.37□□□□□ -0.75
TRAPPC9-203ENST00000517667 CR1P17927 2039 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 A0A0A6YYD5 115 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 GOLGA6L10A0A0M3HER8 536 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 A0A1W2PR48 441 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 PRAMEF25A6NGN4 478 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 RNF223E7ERA6 249 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 EMC8O43402 210 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 CD5LO43866 347 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 AIFM1O95831 613 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 FAM58BPP0C7Q3 252 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 CCDC166P0CW27 439 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 PPP3CBP16298 524 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 GPX3P22352 226 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 PTX3P26022 381 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 GMPRP36959 345 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 STARP49675 285 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 EEFSECP57772 596 aaKnown RBP10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 POU4F1Q01851 419 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 PLCXD2Q0VAA5 305 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 VEZF1Q14119 521 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 CLEC12BQ2HXU8 276 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 CHRFAM7AQ494W8 412 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 MRM1Q6IN84 353 aaKnown RBP10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 GRHL2Q6ISB3 625 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 ZNF704Q6ZNC4 412 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 SH2D5Q6ZV89 423 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 ZNF550Q7Z398 422 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 NUDT13Q86X67 352 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 PLCZ1Q86YW0 608 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 ZNF611Q8N823 705 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 GBP7Q8N8V2 638 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 WDSUB1Q8N9V3 476 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 HUS1BQ8NHY5 278 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 KIF18AQ8NI77 898 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 RDH11Q8TC12 318 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 HGDQ93099 445 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 REPS1Q96D71 796 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 ZNF845Q96IR2 970 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 PBKQ96KB5 322 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 NXF5Q9H1B4 397 aaKnown RBP10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 OPN3Q9H1Y3 402 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 DDX31Q9H8H2 851 aaKnown RBP10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 PSD3Q9NYI0 1048 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 WIF1Q9Y5W5 379 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 TEX264Q9Y6I9 313 aa10.36□□□□□ -0.75
TRAPPC9-203ENST00000517667 ROS1P08922 2347 aa10.35□□□□□ -0.75
TRAPPC9-203ENST00000517667 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC9-203ENST00000517667 PGRMC1O00264 195 aaKnown RBP10.35□□□□□ -0.75
TRAPPC9-203ENST00000517667 HS3ST1O14792 307 aa10.35□□□□□ -0.75
TRAPPC9-203ENST00000517667 ABCB7O75027 752 aa10.35□□□□□ -0.75
TRAPPC9-203ENST00000517667 WISP3O95389 354 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC9-203ENST00000517667 CT62P0C5K7 136 aa10.35□□□□□ -0.75
TRAPPC9-203ENST00000517667 CD1DP15813 335 aa10.35□□□□□ -0.75
TRAPPC9-203ENST00000517667 TBXA2RP21731 343 aa10.35□□□□□ -0.75
TRAPPC9-203ENST00000517667 PTGDSP41222 190 aa10.35□□□□□ -0.75
TRAPPC9-203ENST00000517667 KIR2DL2P43627 348 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC9-203ENST00000517667 CUL3Q13618 768 aa10.35□□□□□ -0.75
TRAPPC9-203ENST00000517667 OR4D1Q15615 310 aa10.35□□□□□ -0.75
TRAPPC9-203ENST00000517667 HP1BP3Q5SSJ5 553 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC9-203ENST00000517667 OR4K14Q8NGD5 310 aa10.35□□□□□ -0.75
TRAPPC9-203ENST00000517667 TMCO6Q96DC7 493 aa10.35□□□□□ -0.75
TRAPPC9-203ENST00000517667 OMA1Q96E52 524 aa10.35□□□□□ -0.75
TRAPPC9-203ENST00000517667 TRMT61AQ96FX7 289 aaKnown RBP10.35□□□□□ -0.75
TRAPPC9-203ENST00000517667 LCORQ96JN0 433 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC9-203ENST00000517667 C16orf45Q96MC5 204 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC9-203ENST00000517667 NODALQ96S42 347 aa10.35□□□□□ -0.75
TRAPPC9-203ENST00000517667 MTERF1Q99551 399 aaKnown RBP10.35□□□□□ -0.75
TRAPPC9-203ENST00000517667 ZNF717Q9BY31 904 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC9-203ENST00000517667 REG4Q9BYZ8 158 aa10.35□□□□□ -0.75
TRAPPC9-203ENST00000517667 OPTCQ9UBM4 332 aa10.35□□□□□ -0.75
TRAPPC9-203ENST00000517667 DKKL1Q9UK85 242 aa10.35□□□□□ -0.75
TRAPPC9-203ENST00000517667 PCDHGA11Q9Y5H2 935 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms