RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 C6orf47O95873 294 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 PGRP06401 933 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 EFNA1P20827 205 aaPredicted RBP11.01□□□□□ -0.65
SNF8-215ENST00000515572 IL12AP29459 219 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 PPICP45877 212 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 TMED10P49755 219 aaKnown RBP11.01□□□□□ -0.65
SNF8-215ENST00000515572 NR0B1P51843 470 aaKnown RBP11.01□□□□□ -0.65
SNF8-215ENST00000515572 POLR2JP52435 117 aaKnown RBP11.01□□□□□ -0.65
SNF8-215ENST00000515572 WNT3P56703 355 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 NFATC3Q12968 1075 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 ZNF169Q14929 603 aaPredicted RBP11.01□□□□□ -0.65
SNF8-215ENST00000515572 SOWAHCQ53LP3 525 aaPredicted RBP11.01□□□□□ -0.65
SNF8-215ENST00000515572 SLC6A19Q695T7 634 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 CGB2Q6NT52 195 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 BHLHB9Q6PI77 547 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 C16orf47Q6ZP98 133 aaPredicted RBP11.01□□□□□ -0.65
SNF8-215ENST00000515572 MSANTD1Q6ZTZ1 278 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 MDS2Q8NDY4 140 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 SIMC1Q8NDZ2 872 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 SFXN5Q8TD22 340 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 MOAP1Q96BY2 351 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 HSPBAP1Q96EW2 488 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 LCORQ96JN0 433 aaPredicted RBP11.01□□□□□ -0.65
SNF8-215ENST00000515572 VSTM2LQ96N03 204 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 MS4A4EQ96PG1 132 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 BTBD9Q96Q07 612 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 OR52E6Q96RD3 313 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 NSRP1Q9H0G5 558 aaKnown RBP11.01□□□□□ -0.65
SNF8-215ENST00000515572 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.01□□□□□ -0.65
SNF8-215ENST00000515572 ANKRA2Q9H9E1 313 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 FOLH1BQ9HBA9 442 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 SIRT3Q9NTG7 399 aaPredicted RBP11.01□□□□□ -0.65
SNF8-215ENST00000515572 ZCCHC3Q9NUD5 404 aaKnown RBP11.01□□□□□ -0.65
SNF8-215ENST00000515572 HPF1Q9NWY4 346 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 PLA2G3Q9NZ20 509 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 LRFN1Q9P244 771 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 BTNL2Q9UIR0 455 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 ANAPC2Q9UJX6 822 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 GPR55Q9Y2T6 319 aaPredicted RBP11.01□□□□□ -0.65
SNF8-215ENST00000515572 PCDHGB6Q9Y5F9 930 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 COPG1Q9Y678 874 aaKnown RBP11.01□□□□□ -0.65
SNF8-215ENST00000515572 FAM208BQ5VWN6 2430 aa11.01□□□□□ -0.65
SNF8-215ENST00000515572 FRG2CA6NGY1 282 aa11□□□□□ -0.65
SNF8-215ENST00000515572 TO15178 435 aa11□□□□□ -0.65
SNF8-215ENST00000515572 SCN2BO60939 215 aa11□□□□□ -0.65
SNF8-215ENST00000515572 ERN1O75460 977 aaKnown RBP11□□□□□ -0.65
SNF8-215ENST00000515572 NEURL1O76050 574 aa11□□□□□ -0.65
SNF8-215ENST00000515572 NADKO95544 446 aaPredicted RBP11□□□□□ -0.65
SNF8-215ENST00000515572 FBXO45P0C2W1 286 aa11□□□□□ -0.65
SNF8-215ENST00000515572 CD46P15529 392 aa11□□□□□ -0.65
SNF8-215ENST00000515572 NAGAP17050 411 aa11□□□□□ -0.65
SNF8-215ENST00000515572 NCF2P19878 526 aaPredicted RBP11□□□□□ -0.65
SNF8-215ENST00000515572 SOX3P41225 446 aa11□□□□□ -0.65
SNF8-215ENST00000515572 CD97P48960 835 aa11□□□□□ -0.65
SNF8-215ENST00000515572 CCT3P49368 545 aaKnown RBP11□□□□□ -0.65
SNF8-215ENST00000515572 DGKQP52824 942 aa11□□□□□ -0.65
SNF8-215ENST00000515572 GYS2P54840 703 aa11□□□□□ -0.65
SNF8-215ENST00000515572 GNGT1P63211 74 aa11□□□□□ -0.65
SNF8-215ENST00000515572 HBA1P69905 142 aa11□□□□□ -0.65
SNF8-215ENST00000515572 PHC1P78364 1004 aa11□□□□□ -0.65
SNF8-215ENST00000515572 ZNF155Q12901 538 aaPredicted RBP11□□□□□ -0.65
SNF8-215ENST00000515572 OR1C1Q15619 314 aa11□□□□□ -0.65
SNF8-215ENST00000515572 ZNHIT3Q15649 155 aaPredicted RBP11□□□□□ -0.65
SNF8-215ENST00000515572 SPDYE7PQ495Y7 208 aa11□□□□□ -0.65
SNF8-215ENST00000515572 VPS26BQ4G0F5 336 aa11□□□□□ -0.65
SNF8-215ENST00000515572 NADK2Q4G0N4 442 aa11□□□□□ -0.65
SNF8-215ENST00000515572 ZCCHC12Q6PEW1 402 aa11□□□□□ -0.65
SNF8-215ENST00000515572 RTL4Q6ZR62 310 aa11□□□□□ -0.65
SNF8-215ENST00000515572 CLECL1Q8IZS7 167 aa11□□□□□ -0.65
SNF8-215ENST00000515572 CYP4Z2PQ8N1L4 340 aa11□□□□□ -0.65
SNF8-215ENST00000515572 CDRT4Q8N9R6 151 aa11□□□□□ -0.65
SNF8-215ENST00000515572 GOLM1Q8NBJ4 401 aa11□□□□□ -0.65
SNF8-215ENST00000515572 TMEM178AQ8NBL3 297 aa11□□□□□ -0.65
SNF8-215ENST00000515572 CATSPER1Q8NEC5 780 aa11□□□□□ -0.65
SNF8-215ENST00000515572 NUP43Q8NFH3 380 aa11□□□□□ -0.65
SNF8-215ENST00000515572 OR56A1Q8NGH5 318 aa11□□□□□ -0.65
SNF8-215ENST00000515572 OR4A15Q8NGL6 344 aa11□□□□□ -0.65
SNF8-215ENST00000515572 TMEM125Q96AQ2 219 aa11□□□□□ -0.65
SNF8-215ENST00000515572 SPACA9Q96E40 222 aaPredicted RBP11□□□□□ -0.65
SNF8-215ENST00000515572 MAGED4Q96JG8 741 aa11□□□□□ -0.65
SNF8-215ENST00000515572 SGCZQ96LD1 299 aa11□□□□□ -0.65
SNF8-215ENST00000515572 C5orf34Q96MH7 638 aa11□□□□□ -0.65
SNF8-215ENST00000515572 CCDC115Q96NT0 180 aa11□□□□□ -0.65
SNF8-215ENST00000515572 LMF2Q9BU23 707 aaKnown RBP11□□□□□ -0.65
SNF8-215ENST00000515572 NXF5Q9H1B4 397 aaKnown RBP11□□□□□ -0.65
SNF8-215ENST00000515572 RMND5AQ9H871 391 aa11□□□□□ -0.65
SNF8-215ENST00000515572 ANKRD10Q9NXR5 420 aa11□□□□□ -0.65
SNF8-215ENST00000515572 ERVK-11Q9UQG0 969 aa11□□□□□ -0.65
SNF8-215ENST00000515572 DTX4Q9Y2E6 619 aa11□□□□□ -0.65
SNF8-215ENST00000515572 CSAG2Q9Y5P2 127 aa11□□□□□ -0.65
SNF8-215ENST00000515572 SNX8Q9Y5X2 465 aa11□□□□□ -0.65
SNF8-215ENST00000515572 NUP214P35658 2090 aaPredicted RBP11□□□□□ -0.65
SNF8-215ENST00000515572 SOX30O94993 753 aa10.99□□□□□ -0.65
SNF8-215ENST00000515572 OR6B1O95007 311 aa10.99□□□□□ -0.65
SNF8-215ENST00000515572 F10P00742 488 aa10.99□□□□□ -0.65
SNF8-215ENST00000515572 ABCB1P08183 1280 aaPredicted RBP10.99□□□□□ -0.65
SNF8-215ENST00000515572 KRT16P08779 473 aa10.99□□□□□ -0.65
SNF8-215ENST00000515572 SOAT1P35610 550 aa10.99□□□□□ -0.65
SNF8-215ENST00000515572 PRIM2P49643 509 aa10.99□□□□□ -0.65
SNF8-215ENST00000515572 SEC24CP53992 1094 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms