RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 HUS1BQ8NHY5 278 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 ZNF689Q96CS4 500 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-213ENST00000514442 TREM1Q9NP99 234 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 MKKSQ9NPJ1 570 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-213ENST00000514442 ALKBH4Q9NXW9 302 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 ACTR10Q9NZ32 417 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 TCRBV5S1A1TA0A578 114 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 KRBOX1C9JBD0 128 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 TLX2O43763 284 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-213ENST00000514442 CAPNS1P04632 268 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 ARF5P84085 180 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 EXOC3L2Q2M3D2 409 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 PUS10Q3MIT2 529 aaKnown RBP12.49□□□□□ -0.41
TCOF1-213ENST00000514442 DEFB134Q4QY38 66 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 MEDAGQ5VYS4 303 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 OLFML2AQ68BL7 652 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 ZNF782Q6ZMW2 699 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-213ENST00000514442 MRPL43Q8N983 215 aaKnown RBP12.49□□□□□ -0.41
TCOF1-213ENST00000514442 MBOAT4Q96T53 435 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 C12orf10Q9HB07 376 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 SLC2A4RGQ9NR83 387 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 EXOSC1Q9Y3B2 195 aaKnown RBP12.49□□□□□ -0.41
TCOF1-213ENST00000514442 KLK4Q9Y5K2 254 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 PAPPAQ13219 1627 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 A0A075B6Q4 140 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 E7EQ34 232 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 SLC16A8O95907 504 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 HLA-DMAP28067 261 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 LIPAP38571 399 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 ENPP2Q13822 863 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 FGL2Q14314 439 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 ZNF630Q2M218 657 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-213ENST00000514442 XAF1Q6GPH4 301 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 TMEM151AQ8N4L1 468 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 NEIL3Q8TAT5 605 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 LOC102723532A0A0G2JNH3 316 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 FAM170BA6NMN3 283 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 WASH3PC4AMC7 463 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 ARNTLO00327 626 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 PRAMEF12O95522 483 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 HRH2P25021 359 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 ARNTP27540 789 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 SSTR2P30874 369 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 RPS26P62854 115 aaKnown RBP12.49□□□□□ -0.41
TCOF1-213ENST00000514442 ZNF234Q14588 700 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 ZNF761Q86XN6 746 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-213ENST00000514442 FUNDC1Q8IVP5 155 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 SLC38A6Q8IZM9 456 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 TCEANCQ8N8B7 351 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 OR56A1Q8NGH5 318 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 OR2T35Q8NGX2 323 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 ARRDC2Q8TBH0 407 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 TRIB3Q96RU7 358 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 SLC22A12Q96S37 553 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 OR51J1Q9H342 316 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 IFT46Q9NQC8 304 aa12.49□□□□□ -0.41
TCOF1-213ENST00000514442 OR2AT4A6NND4 320 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 LRRN3E7EW58 273 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 SMLR1H3BR10 107 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 SGSHP51688 502 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 ZMYND11Q15326 602 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 RTN4RL1Q86UN2 441 aaPredicted RBP12.48□□□□□ -0.41
TCOF1-213ENST00000514442 TCEAL3Q969E4 200 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 CAMK1GQ96NX5 476 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 FEVQ99581 238 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 RTP3Q9BQQ7 232 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 DOHHQ9BU89 302 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 SLC17A9Q9BYT1 436 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 LRRN3Q9H3W5 708 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 BRD7Q9NPI1 651 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 ACSL6Q9UKU0 697 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 PRKYO43930 277 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 GABRB3P28472 473 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 SLC6A11P48066 632 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 USP51Q70EK9 711 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 NDUFAF4Q9P032 175 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 MGAT4CQ9UBM8 478 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 CROCCQ5TZA2 2017 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 ANKRD28O15084 1053 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 OR12D1P0DN82 309 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 RAB3BP20337 219 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 ACADLP28330 430 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 KCNC1P48547 511 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 FNTBP49356 437 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 ERVFC1P60507 584 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 MGAT3Q09327 533 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 FXNQ16595 210 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 UAP1L1Q3KQV9 507 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 TIGD3Q6B0B8 471 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 LETMD1Q6P1Q0 360 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 HTR3DQ70Z44 454 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 LAX1Q8IWV1 398 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 SAMD12Q8N8I0 201 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 OR5T2Q8NGG2 359 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 OR6F1Q8NGZ6 308 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 FGF13Q92913 245 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 MMABQ96EY8 250 aaPredicted RBP12.48□□□□□ -0.41
TCOF1-213ENST00000514442 TOX2Q96NM4 488 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 ZNF300Q96RE9 604 aaPredicted RBP12.48□□□□□ -0.41
TCOF1-213ENST00000514442 ARL6Q9H0F7 186 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms