RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 TAS2R39P59534 338 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 SIRPAP78324 504 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 FGFBP1Q14512 234 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 GUSBP1Q15486 140 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 MSS51Q4VC12 460 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 MED27Q6P2C8 311 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 TRMT10BQ6PF06 316 aaKnown RBP9.87□□□□□ -0.83
DDX41-216ENST00000513562 PLCZ1Q86YW0 608 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 ZNF610Q8N9Z0 462 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 PDPRQ8NCN5 879 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 OR7G3Q8NG95 312 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 OR7G1Q8NGA0 311 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 RGMAQ96B86 450 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 TRMT61AQ96FX7 289 aaKnown RBP9.87□□□□□ -0.83
DDX41-216ENST00000513562 SFXN2Q96NB2 322 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 C19orf24Q9BVV8 132 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 ZNF717Q9BY31 904 aaPredicted RBP9.87□□□□□ -0.83
DDX41-216ENST00000513562 AMBRA1Q9C0C7 1298 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 DERL2Q9GZP9 239 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 SLCO5A1Q9H2Y9 848 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 ASB4Q9Y574 426 aa9.87□□□□□ -0.83
DDX41-216ENST00000513562 SVEP1Q4LDE5 3571 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 A0A0A6YYD5 115 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 FAM95CA0A1B0GW59 222 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 A0A1W2PS29 197 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 PRAMEF25A6NGN4 478 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 TMPRSS11DO60235 418 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 UGT2B11O75310 529 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 AIFM1O95831 613 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 THBS1P07996 1170 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 CNTFP26441 200 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 CXCR5P32302 372 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 ACVR1BP36896 505 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 RAP1GDS1P52306 607 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 OCRLQ01968 901 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 NNATQ16517 81 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 C6orf52Q5T4I8 152 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 OR52E8Q6IFG1 317 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 SULT1C3Q6IMI6 304 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 ADAM5Q6NVV9 412 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 LRRC70Q7Z2Q7 622 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 ZC3HC1Q86WB0 502 aaKnown RBP9.86□□□□□ -0.83
DDX41-216ENST00000513562 RNF175Q8N4F7 328 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 FIG4Q92562 907 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 AKAP1Q92667 903 aaKnown RBP eCLIP9.86□□□□□ -0.83
DDX41-216ENST00000513562 MAGOHBQ96A72 148 aaKnown RBP9.86□□□□□ -0.83
DDX41-216ENST00000513562 REPS1Q96D71 796 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 OMA1Q96E52 524 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 PLPPR2Q96GM1 343 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 CENPKQ9BS16 269 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 KLHL4Q9C0H6 718 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 RNF122Q9H9V4 155 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 POPDC3Q9HBV1 291 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 PRM3Q9NNZ6 103 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 LYARQ9NX58 379 aaKnown RBP9.86□□□□□ -0.83
DDX41-216ENST00000513562 FBXL2Q9UKC9 423 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 PROCRQ9UNN8 238 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 MRPS18CQ9Y3D5 142 aaKnown RBP9.86□□□□□ -0.83
DDX41-216ENST00000513562 PSAT1Q9Y617 370 aa9.86□□□□□ -0.83
DDX41-216ENST00000513562 CCNT2O60583 730 aaKnown RBP9.85□□□□□ -0.83
DDX41-216ENST00000513562 EEDO75530 441 aaKnown RBP9.85□□□□□ -0.83
DDX41-216ENST00000513562 WISP3O95389 354 aaPredicted RBP9.85□□□□□ -0.83
DDX41-216ENST00000513562 IGHV4-39P01824 125 aa9.85□□□□□ -0.83
DDX41-216ENST00000513562 SOD3P08294 240 aa9.85□□□□□ -0.83
DDX41-216ENST00000513562 FAM58BPP0C7Q3 252 aa9.85□□□□□ -0.83
DDX41-216ENST00000513562 S1PR1P21453 382 aa9.85□□□□□ -0.83
DDX41-216ENST00000513562 THBS2P35442 1172 aa9.85□□□□□ -0.83
DDX41-216ENST00000513562 PIK3CBP42338 1070 aa9.85□□□□□ -0.83
DDX41-216ENST00000513562 B3GALT5-AS1P59052 145 aa9.85□□□□□ -0.83
DDX41-216ENST00000513562 HMGCS1Q01581 520 aa9.85□□□□□ -0.83
DDX41-216ENST00000513562 PLCXD2Q0VAA5 305 aa9.85□□□□□ -0.83
DDX41-216ENST00000513562 CYP1B1Q16678 543 aa9.85□□□□□ -0.83
DDX41-216ENST00000513562 CHMP1BQ7LBR1 199 aa9.85□□□□□ -0.83
DDX41-216ENST00000513562 GPSM1Q86YR5 675 aa9.85□□□□□ -0.83
DDX41-216ENST00000513562 HUS1BQ8NHY5 278 aa9.85□□□□□ -0.83
DDX41-216ENST00000513562 DTNBP1Q96EV8 351 aa9.85□□□□□ -0.83
DDX41-216ENST00000513562 ITPAQ9BY32 194 aa9.85□□□□□ -0.83
DDX41-216ENST00000513562 WDR41Q9HAD4 459 aa9.85□□□□□ -0.83
DDX41-216ENST00000513562 TMEM160Q9NX00 188 aa9.85□□□□□ -0.83
DDX41-216ENST00000513562 EHD3Q9NZN3 535 aa9.85□□□□□ -0.83
DDX41-216ENST00000513562 DKKL1Q9UK85 242 aa9.85□□□□□ -0.83
DDX41-216ENST00000513562 ZNF175Q9Y473 711 aa9.85□□□□□ -0.83
DDX41-216ENST00000513562 B4DXG7 233 aa9.84□□□□□ -0.83
DDX41-216ENST00000513562 ACOX3O15254 700 aa9.84□□□□□ -0.83
DDX41-216ENST00000513562 ZIC3O60481 467 aa9.84□□□□□ -0.83
DDX41-216ENST00000513562 ABCB7O75027 752 aa9.84□□□□□ -0.83
DDX41-216ENST00000513562 ADAM11O75078 769 aa9.84□□□□□ -0.83
DDX41-216ENST00000513562 TNFRSF21O75509 655 aa9.84□□□□□ -0.83
DDX41-216ENST00000513562 DANCRP0C864 163 aa9.84□□□□□ -0.83
DDX41-216ENST00000513562 PEPDP12955 493 aa9.84□□□□□ -0.83
DDX41-216ENST00000513562 BSGP35613 385 aa9.84□□□□□ -0.83
DDX41-216ENST00000513562 CLDN15P56746 228 aa9.84□□□□□ -0.83
DDX41-216ENST00000513562 DDX39BQ13838 428 aaKnown RBP9.84□□□□□ -0.83
DDX41-216ENST00000513562 FRG1Q14331 258 aaKnown RBP9.84□□□□□ -0.83
DDX41-216ENST00000513562 OR4D1Q15615 310 aa9.84□□□□□ -0.83
DDX41-216ENST00000513562 EXOC3L2Q2M3D2 409 aa9.84□□□□□ -0.83
DDX41-216ENST00000513562 C6orf163Q5TEZ5 329 aa9.84□□□□□ -0.83
DDX41-216ENST00000513562 STEAP4Q687X5 459 aa9.84□□□□□ -0.83
DDX41-216ENST00000513562 CCDC137Q6PK04 289 aaKnown RBP9.84□□□□□ -0.83
DDX41-216ENST00000513562 CYP20A1Q6UW02 462 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms