RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 TCAIMQ8N3R3 496 aa12.64□□□□□ -0.39
SPCS3-204ENST00000513139 OR1J4Q8NGS1 313 aa12.64□□□□□ -0.39
SPCS3-204ENST00000513139 ZNF473Q8WTR7 871 aaKnown RBP12.64□□□□□ -0.39
SPCS3-204ENST00000513139 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.64□□□□□ -0.39
SPCS3-204ENST00000513139 CDKL2Q92772 493 aa12.64□□□□□ -0.39
SPCS3-204ENST00000513139 RIT1Q92963 219 aa12.64□□□□□ -0.39
SPCS3-204ENST00000513139 MCMBPQ9BTE3 642 aa12.64□□□□□ -0.39
SPCS3-204ENST00000513139 FUT8Q9BYC5 575 aa12.64□□□□□ -0.39
SPCS3-204ENST00000513139 ACSS3Q9H6R3 686 aa12.64□□□□□ -0.39
SPCS3-204ENST00000513139 KLHL28Q9NXS3 571 aa12.64□□□□□ -0.39
SPCS3-204ENST00000513139 CTNNAL1Q9UBT7 734 aa12.64□□□□□ -0.39
SPCS3-204ENST00000513139 PHF11Q9UIL8 331 aa12.64□□□□□ -0.39
SPCS3-204ENST00000513139 MTO1Q9Y2Z2 717 aaKnown RBP12.64□□□□□ -0.39
SPCS3-204ENST00000513139 A0A087WUV0 522 aaPredicted RBP12.63□□□□□ -0.39
SPCS3-204ENST00000513139 A0A1W2PNV4 684 aa12.63□□□□□ -0.39
SPCS3-204ENST00000513139 RTCAO00442 366 aaKnown RBP12.63□□□□□ -0.39
SPCS3-204ENST00000513139 OR10H2O60403 315 aa12.63□□□□□ -0.39
SPCS3-204ENST00000513139 GPR75O95800 540 aa12.63□□□□□ -0.39
SPCS3-204ENST00000513139 F12P00748 615 aaPredicted RBP12.63□□□□□ -0.39
SPCS3-204ENST00000513139 CLPSP04118 112 aa12.63□□□□□ -0.39
SPCS3-204ENST00000513139 CD22P20273 847 aa12.63□□□□□ -0.39
SPCS3-204ENST00000513139 CD79BP40259 229 aa12.63□□□□□ -0.39
SPCS3-204ENST00000513139 CASP2P42575 452 aa12.63□□□□□ -0.39
SPCS3-204ENST00000513139 NRG3P56975 720 aa12.63□□□□□ -0.39
SPCS3-204ENST00000513139 TNFRSF17Q02223 184 aa12.63□□□□□ -0.39
SPCS3-204ENST00000513139 SLAMF1Q13291 335 aa12.63□□□□□ -0.39
SPCS3-204ENST00000513139 E2F2Q14209 437 aa12.63□□□□□ -0.39
SPCS3-204ENST00000513139 CAPRIN1Q14444 709 aaKnown RBP12.63□□□□□ -0.39
SPCS3-204ENST00000513139 SETDB1Q15047 1291 aa12.63□□□□□ -0.39
SPCS3-204ENST00000513139 TGFBIQ15582 683 aa12.63□□□□□ -0.39
SPCS3-204ENST00000513139 TSNQ15631 228 aaKnown RBP12.63□□□□□ -0.39
SPCS3-204ENST00000513139 TBCCQ15814 346 aa12.63□□□□□ -0.39
SPCS3-204ENST00000513139 UAP1Q16222 522 aaPredicted RBP12.63□□□□□ -0.39
SPCS3-204ENST00000513139 TMEM64Q6YI46 380 aa12.63□□□□□ -0.39
SPCS3-204ENST00000513139 YRDCQ86U90 279 aaKnown RBP12.63□□□□□ -0.39
SPCS3-204ENST00000513139 GPR180Q86V85 440 aa12.63□□□□□ -0.39
SPCS3-204ENST00000513139 C17orf47Q8NEP4 570 aa12.63□□□□□ -0.39
SPCS3-204ENST00000513139 UBLCP1Q8WVY7 318 aaPredicted RBP12.63□□□□□ -0.39
SPCS3-204ENST00000513139 CTHRC1Q96CG8 243 aa12.63□□□□□ -0.39
SPCS3-204ENST00000513139 CPNE1Q99829 537 aa12.63□□□□□ -0.39
SPCS3-204ENST00000513139 G6PC3Q9BUM1 346 aa12.63□□□□□ -0.39
SPCS3-204ENST00000513139 CXorf56Q9H5V9 222 aa12.63□□□□□ -0.39
SPCS3-204ENST00000513139 ELOVL5Q9NYP7 299 aa12.63□□□□□ -0.39
SPCS3-204ENST00000513139 POC1B-GALNT4F8VUJ3 575 aa12.62□□□□□ -0.39
SPCS3-204ENST00000513139 GNB5O14775 395 aa12.62□□□□□ -0.39
SPCS3-204ENST00000513139 TAPBPO15533 448 aa12.62□□□□□ -0.39
SPCS3-204ENST00000513139 LOXP28300 417 aaPredicted RBP12.62□□□□□ -0.39
SPCS3-204ENST00000513139 SERPINB1P30740 379 aa12.62□□□□□ -0.39
SPCS3-204ENST00000513139 UGT2B10P36537 528 aa12.62□□□□□ -0.39
SPCS3-204ENST00000513139 GP5P40197 560 aa12.62□□□□□ -0.39
SPCS3-204ENST00000513139 FUT7Q11130 342 aa12.62□□□□□ -0.39
SPCS3-204ENST00000513139 SNTA1Q13424 505 aa12.62□□□□□ -0.39
SPCS3-204ENST00000513139 TNK1Q13470 666 aa12.62□□□□□ -0.39
SPCS3-204ENST00000513139 GRTP1Q5TC63 336 aa12.62□□□□□ -0.39
SPCS3-204ENST00000513139 HLA-DQA1Q5Y7H0 255 aa12.62□□□□□ -0.39
SPCS3-204ENST00000513139 OR4C11Q6IEV9 310 aa12.62□□□□□ -0.39
SPCS3-204ENST00000513139 SLC30A6Q6NXT4 461 aa12.62□□□□□ -0.39
SPCS3-204ENST00000513139 HIPK1Q86Z02 1210 aa12.62□□□□□ -0.39
SPCS3-204ENST00000513139 TRIM42Q8IWZ5 723 aa12.62□□□□□ -0.39
SPCS3-204ENST00000513139 ZCCHC7Q8N3Z6 543 aaKnown RBP12.62□□□□□ -0.39
SPCS3-204ENST00000513139 TMEM171Q8WVE6 324 aa12.62□□□□□ -0.39
SPCS3-204ENST00000513139 CAVIN3Q969G5 261 aa12.62□□□□□ -0.39
SPCS3-204ENST00000513139 UBE2E3Q969T4 207 aa12.62□□□□□ -0.39
SPCS3-204ENST00000513139 CMTM7Q96FZ5 175 aa12.62□□□□□ -0.39
SPCS3-204ENST00000513139 TMEM79Q9BSE2 394 aa12.62□□□□□ -0.39
SPCS3-204ENST00000513139 RHOJQ9H4E5 214 aa12.62□□□□□ -0.39
SPCS3-204ENST00000513139 NSMCE4AQ9NXX6 385 aa12.62□□□□□ -0.39
SPCS3-204ENST00000513139 TXNDC16Q9P2K2 825 aa12.62□□□□□ -0.39
SPCS3-204ENST00000513139 PTBP2Q9UKA9 531 aaKnown RBP12.62□□□□□ -0.39
SPCS3-204ENST00000513139 DLGAP4Q9Y2H0 992 aa12.62□□□□□ -0.39
SPCS3-204ENST00000513139 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.62□□□□□ -0.393e-13■□□□□ 10.7
SPCS3-204ENST00000513139 PRR14LQ5THK1 2151 aa12.62□□□□□ -0.39
SPCS3-204ENST00000513139 FAM95CA0A1B0GW59 222 aa12.61□□□□□ -0.39
SPCS3-204ENST00000513139 LRRC14BA6NHZ5 514 aa12.61□□□□□ -0.39
SPCS3-204ENST00000513139 NCF1BA6NI72 391 aaPredicted RBP12.61□□□□□ -0.39
SPCS3-204ENST00000513139 NCF1CA8MVU1 366 aaPredicted RBP12.61□□□□□ -0.39
SPCS3-204ENST00000513139 TLX2O43763 284 aaPredicted RBP12.61□□□□□ -0.39
SPCS3-204ENST00000513139 STK16O75716 305 aa12.61□□□□□ -0.39
SPCS3-204ENST00000513139 CBR3O75828 277 aa12.61□□□□□ -0.39
SPCS3-204ENST00000513139 TGFB1P01137 390 aa12.61□□□□□ -0.39
SPCS3-204ENST00000513139 SHBGP04278 402 aa12.61□□□□□ -0.39
SPCS3-204ENST00000513139 ABHD2P08910 425 aa12.61□□□□□ -0.39
SPCS3-204ENST00000513139 SLC35E2BP0CK96 405 aa12.61□□□□□ -0.39
SPCS3-204ENST00000513139 SLC35E2P0CK97 266 aa12.61□□□□□ -0.39
SPCS3-204ENST00000513139 NCF1P14598 390 aaPredicted RBP12.61□□□□□ -0.39
SPCS3-204ENST00000513139 NAGAP17050 411 aa12.61□□□□□ -0.39
SPCS3-204ENST00000513139 HSD17B3P37058 310 aa12.61□□□□□ -0.39
SPCS3-204ENST00000513139 BUD31P41223 144 aaPredicted RBP12.61□□□□□ -0.39
SPCS3-204ENST00000513139 ARFIP1P53367 373 aa12.61□□□□□ -0.39
SPCS3-204ENST00000513139 GFRA1P56159 465 aa12.61□□□□□ -0.39
SPCS3-204ENST00000513139 TAS2R39P59534 338 aa12.61□□□□□ -0.39
SPCS3-204ENST00000513139 SRYQ05066 204 aa12.61□□□□□ -0.39
SPCS3-204ENST00000513139 PDK4Q16654 411 aa12.61□□□□□ -0.39
SPCS3-204ENST00000513139 DEPDC1Q5TB30 811 aa12.61□□□□□ -0.39
SPCS3-204ENST00000513139 KHDRBS2Q5VWX1 349 aaKnown RBP12.61□□□□□ -0.39
SPCS3-204ENST00000513139 C18orf63Q68DL7 685 aa12.61□□□□□ -0.39
SPCS3-204ENST00000513139 OR2A2Q6IF42 318 aa12.61□□□□□ -0.39
SPCS3-204ENST00000513139 SULT1C3Q6IMI6 304 aa12.61□□□□□ -0.39
SPCS3-204ENST00000513139 EMBQ6PCB8 327 aa12.61□□□□□ -0.39
SPCS3-204ENST00000513139 ANGPTL8Q6UXH0 198 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms