RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 ZNF354AO60765 605 aaPredicted RBP6.6□□□□□ -1.35
USP46-208ENST00000512656 SLC35E2BP0CK96 405 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 SLC35E2P0CK97 266 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 NR2F6P10588 404 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 GFAPP14136 432 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 GALNSP34059 522 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 PIGAP37287 484 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 MAGEA4P43358 317 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 TMED10P49755 219 aaKnown RBP6.6□□□□□ -1.35
USP46-208ENST00000512656 ART1P52961 327 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 ALDH18A1P54886 795 aaKnown RBP6.6□□□□□ -1.35
USP46-208ENST00000512656 PLTPP55058 493 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 HERVK_113P63132 956 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 ERVK-8P63133 956 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 FOLH1Q04609 750 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 CHRNEQ04844 493 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 CUL3Q13618 768 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 ZNF267Q14586 743 aaPredicted RBP6.6□□□□□ -1.35
USP46-208ENST00000512656 HSPB2Q16082 182 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 C10orf62Q5T681 223 aaPredicted RBP6.6□□□□□ -1.35
USP46-208ENST00000512656 LCE4AQ5TA78 99 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 C6orf163Q5TEZ5 329 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 HLA-DQA1Q5Y7H0 255 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 TMEM198Q66K66 360 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 RTL6Q6ICC9 239 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 METTL2BQ6P1Q9 378 aaKnown RBP6.6□□□□□ -1.35
USP46-208ENST00000512656 KLC3Q6P597 504 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 ARSKQ6UWY0 536 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 CMC1Q7Z7K0 106 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 OR4N5Q8IXE1 308 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 C9orf40Q8IXQ3 194 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 LRRC25Q8N386 305 aaPredicted RBP6.6□□□□□ -1.35
USP46-208ENST00000512656 CHDHQ8NE62 594 aaPredicted RBP6.6□□□□□ -1.35
USP46-208ENST00000512656 SPATA4Q8NEY3 305 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 RIT1Q92963 219 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 PPWD1Q96BP3 646 aaKnown RBP6.6□□□□□ -1.35
USP46-208ENST00000512656 ZNF597Q96LX8 424 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 MTERF1Q99551 399 aaKnown RBP6.6□□□□□ -1.35
USP46-208ENST00000512656 DOHHQ9BU89 302 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 ERVK-6Q9BXR3 956 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 WWTR1Q9GZV5 400 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 ZNF703Q9H7S9 590 aaPredicted RBP6.6□□□□□ -1.35
USP46-208ENST00000512656 DMRT3Q9NQL9 472 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 SNX15Q9NRS6 342 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 PSD3Q9NYI0 1048 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 Q9UFV3 132 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 ERVK-19Q9WJR5 959 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 FAM215AQ9Y5M1 114 aa6.6□□□□□ -1.35
USP46-208ENST00000512656 PHF3Q92576 2039 aaKnown RBP6.6□□□□□ -1.35
USP46-208ENST00000512656 C2orf92A0A1B0GVN3 265 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 AHRRA9YTQ3 701 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 FOXE1O00358 373 aaPredicted RBP6.59□□□□□ -1.35
USP46-208ENST00000512656 PLPP1O14494 284 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 RAD51CO43502 376 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 CDH16O75309 829 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 SEMA3DO95025 777 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 SNX4O95219 450 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 HTR3BO95264 441 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 NADKO95544 446 aaPredicted RBP6.59□□□□□ -1.35
USP46-208ENST00000512656 FAM58BPP0C7Q3 252 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 KRT15P19012 456 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 GDF1P27539 372 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 ARL1P40616 181 aaPredicted RBP6.59□□□□□ -1.35
USP46-208ENST00000512656 KIR2DL3P43628 341 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 MASP1P48740 699 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 NR0B1P51843 470 aaKnown RBP6.59□□□□□ -1.35
USP46-208ENST00000512656 NRG3P56975 720 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 SLC37A1P57057 533 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 GPX6P59796 221 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 RPS13P62277 151 aaKnown RBP6.59□□□□□ -1.35
USP46-208ENST00000512656 MRPS25P82663 173 aaKnown RBP6.59□□□□□ -1.35
USP46-208ENST00000512656 DLG1Q12959 904 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 GTF2H2Q13888 395 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 ACAP2Q15057 778 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 EBPQ15125 230 aaKnown RBP6.59□□□□□ -1.35
USP46-208ENST00000512656 RPS6KA2Q15349 733 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 NTRK2Q16620 822 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 PFKFB4Q16877 469 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 PRAMEF20Q5VT98 475 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 C18orf63Q68DL7 685 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 OR52E8Q6IFG1 317 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 GTF2H2CQ6P1K8 395 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 PAGE2Q7Z2X7 111 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 REC114Q7Z4M0 266 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 WDR53Q7Z5U6 358 aaPredicted RBP6.59□□□□□ -1.35
USP46-208ENST00000512656 NUDT13Q86X67 352 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 PM20D2Q8IYS1 436 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 ULK2Q8IYT8 1036 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 OR10G3Q8NGC4 313 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 NEIL3Q8TAT5 605 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 DIO2Q92813 273 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 NINJ1Q92982 152 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 ATP6V1E2Q96A05 226 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 NXNL1Q96CM4 212 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 JSRP1Q96MG2 331 aaPredicted RBP6.59□□□□□ -1.35
USP46-208ENST00000512656 SECISBP2Q96T21 854 aaKnown RBP6.59□□□□□ -1.35
USP46-208ENST00000512656 SERPINI1Q99574 410 aa6.59□□□□□ -1.35
USP46-208ENST00000512656 SORBS1Q9BX66 1292 aaKnown RBP6.59□□□□□ -1.35
USP46-208ENST00000512656 DDX31Q9H8H2 851 aaKnown RBP6.59□□□□□ -1.35
USP46-208ENST00000512656 IPPKQ9H8X2 491 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms