RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 DDAH2O95865 285 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 WDPCPO95876 746 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 FTH1P19P0C7X4 201 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 ARFIP1P53367 373 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 ELAVL1Q15717 326 aaKnown RBP4.83□□□□□ -1.64
PHF3-210ENST00000509876 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.83□□□□□ -1.64
PHF3-210ENST00000509876 RPL13AP3Q6NVV1 102 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 CPEB2Q7Z5Q1 589 aaKnown RBP4.83□□□□□ -1.64
PHF3-210ENST00000509876 TMEM105Q8N8V8 129 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 OR5K1Q8NHB7 308 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 SNX33Q8WV41 574 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 GTPBP3Q969Y2 492 aaKnown RBP4.83□□□□□ -1.64
PHF3-210ENST00000509876 CIDECQ96AQ7 238 aaPredicted RBP4.83□□□□□ -1.64
PHF3-210ENST00000509876 COX14Q96I36 57 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 ORAI3Q9BRQ5 295 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 TXLNGYQ9BZA5 131 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 OR10A5Q9H207 317 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 EHD3Q9NZN3 535 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 KLF13Q9Y2Y9 288 aaPredicted RBP4.83□□□□□ -1.64
PHF3-210ENST00000509876 PTGDR2Q9Y5Y4 395 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 SLC22A7Q9Y694 548 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 U3KQV3 271 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 BLOC1S5-TXNDC5H3BN57 136 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 HCN1O60741 890 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 KRT8P05787 483 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 PNMTP11086 282 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 LAMP1P11279 417 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 GGT5P36269 586 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 ID4P47928 161 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 ACADVLP49748 655 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 GALK2Q01415 458 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 KCNC4Q03721 635 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 SLC22A10Q63ZE4 541 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 ABHD17CQ6PCB6 329 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 ZNF551Q7Z340 670 aaPredicted RBP4.83□□□□□ -1.64
PHF3-210ENST00000509876 THAP5Q7Z6K1 395 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 HPS6Q86YV9 775 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 SLC34A3Q8N130 599 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 CACTIN-AS1Q8N1I8 211 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 MORN4Q8NDC4 146 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 PYURFQ96I23 114 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 SEC61A2Q9H9S3 476 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 ELL3Q9HB65 397 aaPredicted RBP4.83□□□□□ -1.64
PHF3-210ENST00000509876 C5AR2Q9P296 337 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 SCN1AP35498 2009 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 DCDC2BA2VCK2 349 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 H3BML4 177 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 I6L893 689 aaPredicted RBP4.83□□□□□ -1.64
PHF3-210ENST00000509876 PPM1DO15297 605 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 GSC2O15499 205 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 CYP4B1P13584 511 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 CXADRP78310 365 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 EXOSC7Q15024 291 aaKnown RBP4.83□□□□□ -1.64
PHF3-210ENST00000509876 ZCCHC7Q8N3Z6 543 aaKnown RBP4.83□□□□□ -1.64
PHF3-210ENST00000509876 LCORQ96JN0 433 aaPredicted RBP4.83□□□□□ -1.64
PHF3-210ENST00000509876 POLR2J3Q9H1A7 115 aaKnown RBP4.83□□□□□ -1.64
PHF3-210ENST00000509876 NGBQ9NPG2 151 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 PAPOLBQ9NRJ5 636 aaKnown RBP4.83□□□□□ -1.64
PHF3-210ENST00000509876 EIF3KQ9UBQ5 218 aaKnown RBP4.83□□□□□ -1.64
PHF3-210ENST00000509876 PCDHGB5Q9Y5G0 923 aa4.83□□□□□ -1.64
PHF3-210ENST00000509876 MICAL3Q7RTP6 2002 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 A0A1W2PPL8 197 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 AQP12BA6NM10 295 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 GALR3O60755 368 aaPredicted RBP4.82□□□□□ -1.64
PHF3-210ENST00000509876 CREG1O75629 220 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 TIPRLO75663 272 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 IFI30P13284 250 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 PSMB9P28065 219 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 IL10RAQ13651 578 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 PUM1Q14671 1186 aaKnown RBP eCLIP4.82□□□□□ -1.64
PHF3-210ENST00000509876 CCSMST1Q4G0I0 132 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 COQ5Q5HYK3 327 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 ARL9Q6T311 187 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 CDHR3Q6ZTQ4 885 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 MAMDC2Q7Z304 686 aaPredicted RBP4.82□□□□□ -1.64
PHF3-210ENST00000509876 GPR141Q7Z602 305 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 UEVLDQ8IX04 471 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 AQP12AQ8IXF9 295 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 ZNF740Q8NDX6 193 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 FANK1Q8TC84 345 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 TSEN15Q8WW01 171 aaKnown RBP4.82□□□□□ -1.64
PHF3-210ENST00000509876 ZNF570Q96NI8 536 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 NUDT22Q9BRQ3 303 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 POLDIP3Q9BY77 421 aaKnown RBP4.82□□□□□ -1.64
PHF3-210ENST00000509876 GSTK1Q9Y2Q3 226 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 RLFQ13129 1914 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 IDSB3KWA1 339 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 FTCDNL1E5RQL4 147 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 ARPC2O15144 300 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 NELFEP18615 380 aaKnown RBP4.82□□□□□ -1.64
PHF3-210ENST00000509876 DNAJA1P31689 397 aaKnown RBP4.82□□□□□ -1.64
PHF3-210ENST00000509876 DNASE1L1P49184 302 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 TRAF3Q13114 568 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 FAM53BQ14153 422 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 ZIK1Q3SY52 487 aaPredicted RBP4.82□□□□□ -1.64
PHF3-210ENST00000509876 SLC36A3Q495N2 470 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 PRSS42Q7Z5A4 293 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 OR10G2Q8NGC3 310 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 OR1N1Q8NGS0 311 aa4.82□□□□□ -1.64
PHF3-210ENST00000509876 NT5CQ8TCD5 201 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms