RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 EPHA6Q9UF33 1036 aa8.68□□□□□ -1.02
HTT-205ENST00000509043 PSORS1C1Q9UIG5 152 aa8.68□□□□□ -1.02
HTT-205ENST00000509043 FBXL21Q9UKT6 434 aa8.68□□□□□ -1.02
HTT-205ENST00000509043 CDC14AQ9UNH5 594 aa8.68□□□□□ -1.02
HTT-205ENST00000509043 RNF6Q9Y252 685 aa8.68□□□□□ -1.02
HTT-205ENST00000509043 MRPS33Q9Y291 106 aaKnown RBP8.68□□□□□ -1.02
HTT-205ENST00000509043 PCDHGA10Q9Y5H3 936 aa8.68□□□□□ -1.02
HTT-205ENST00000509043 A0A1W2PR77 199 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 SH3PXD2BA1X283 911 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 HYKKA2RU49 373 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 PRAMEF27A3QJZ7 478 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 TTC36A6NLP5 189 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 J3KTA2 159 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 P2RX6O15547 441 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 XPNPEP2O43895 674 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 OR10H3O60404 316 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 COQ9O75208 318 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 PIPP12273 146 aaPredicted RBP8.67□□□□□ -1.02
HTT-205ENST00000509043 GABRB1P18505 474 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 ACVR2AP27037 513 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 PCSK6P29122 969 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 FMO3P31513 532 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 CTSKP43235 329 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 EPHA4P54764 986 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 EMP3P54852 163 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 RAB38P57729 211 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 FUT5Q11128 374 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 ST3GAL3Q11203 375 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 LARS2Q15031 903 aaKnown RBP8.67□□□□□ -1.02
HTT-205ENST00000509043 TRAM2Q15035 370 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 PTGES3Q15185 160 aaKnown RBP8.67□□□□□ -1.02
HTT-205ENST00000509043 LEXMQ3ZCV2 418 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 ZNF628Q5EBL2 1059 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 ZNF311Q5JNZ3 666 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 FGD3Q5JSP0 725 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 EXOSC6Q5RKV6 272 aaKnown RBP8.67□□□□□ -1.02
HTT-205ENST00000509043 TMEM201Q5SNT2 666 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 SLC25A30Q5SVS4 291 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 SLX4IPQ5VYV7 408 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 KLHL17Q6TDP4 642 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 DEF8Q6ZN54 512 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 PEX5LQ8IYB4 626 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 DNAJC22Q8N4W6 341 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 C19orf47Q8N9M1 422 aaKnown RBP8.67□□□□□ -1.02
HTT-205ENST00000509043 FLCNQ8NFG4 579 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 OR9Q2Q8NGE9 314 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 ZCCHC10Q8TBK6 192 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 FAR1Q8WVX9 515 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 APH1BQ8WW43 257 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 UCN3Q969E3 161 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 SLC38A4Q969I6 547 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 OTUB1Q96FW1 271 aaPredicted RBP8.67□□□□□ -1.02
HTT-205ENST00000509043 ZNF578Q96N58 590 aaPredicted RBP8.67□□□□□ -1.02
HTT-205ENST00000509043 CD180Q99467 661 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 COPS4Q9BT78 406 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 IER2Q9BTL4 223 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 LRRC61Q9BV99 259 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 PRRG3Q9BZD7 231 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 SLC38A1Q9H2H9 487 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 PIGUQ9H490 435 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 SYNPO2LQ9H987 977 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 IL21RQ9HBE5 538 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 SLC24A3Q9HC58 644 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 LTB4R2Q9NPC1 389 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 KRCC1Q9NPI7 259 aaPredicted RBP8.67□□□□□ -1.02
HTT-205ENST00000509043 ACOT13Q9NPJ3 140 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 ENAMQ9NRM1 1142 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 RLIMQ9NVW2 624 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 PAK1IP1Q9NWT1 392 aaPredicted RBP8.67□□□□□ -1.02
HTT-205ENST00000509043 ERVK-18Q9QC07 812 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 WARS2Q9UGM6 360 aaKnown RBP8.67□□□□□ -1.02
HTT-205ENST00000509043 ENPP5Q9UJA9 477 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 A4GNTQ9UNA3 340 aa8.67□□□□□ -1.02
HTT-205ENST00000509043 NUP214P35658 2090 aaPredicted RBP8.66□□□□□ -1.02
HTT-205ENST00000509043 DOCK9Q9BZ29 2069 aa8.66□□□□□ -1.02
HTT-205ENST00000509043 LOC105369274A0A096LPK9 316 aa8.66□□□□□ -1.02
HTT-205ENST00000509043 LOC102723532A0A0G2JNH3 316 aa8.66□□□□□ -1.02
HTT-205ENST00000509043 TRBV4-1A0A0J9YWV2 114 aa8.66□□□□□ -1.02
HTT-205ENST00000509043 IRGMA1A4Y4 181 aa8.66□□□□□ -1.02
HTT-205ENST00000509043 CLDN24A6NM45 220 aa8.66□□□□□ -1.02
HTT-205ENST00000509043 TLR4O00206 839 aa8.66□□□□□ -1.02
HTT-205ENST00000509043 CYR61O00622 381 aa8.66□□□□□ -1.02
HTT-205ENST00000509043 FMO6PO60774 539 aa8.66□□□□□ -1.02
HTT-205ENST00000509043 NME6O75414 186 aaPredicted RBP8.66□□□□□ -1.02
HTT-205ENST00000509043 PRKRAO75569 313 aaKnown RBP8.66□□□□□ -1.02
HTT-205ENST00000509043 UBXN7O94888 489 aa8.66□□□□□ -1.02
HTT-205ENST00000509043 GABARAPO95166 117 aa8.66□□□□□ -1.02
HTT-205ENST00000509043 OR5F1O95221 314 aa8.66□□□□□ -1.02
HTT-205ENST00000509043 BCL10O95999 233 aa8.66□□□□□ -1.02
HTT-205ENST00000509043 GASTP01350 101 aa8.66□□□□□ -1.02
HTT-205ENST00000509043 STATHP02808 62 aa8.66□□□□□ -1.02
HTT-205ENST00000509043 CDK1P06493 297 aa8.66□□□□□ -1.02
HTT-205ENST00000509043 DBIP07108 87 aaKnown RBP8.66□□□□□ -1.02
HTT-205ENST00000509043 ALOX5P09917 674 aa8.66□□□□□ -1.02
HTT-205ENST00000509043 SLC35E2P0CK97 266 aa8.66□□□□□ -1.02
HTT-205ENST00000509043 C8orf89P0DMQ9 161 aa8.66□□□□□ -1.02
HTT-205ENST00000509043 CDH3P22223 829 aa8.66□□□□□ -1.02
HTT-205ENST00000509043 CHMP24386 653 aa8.66□□□□□ -1.02
HTT-205ENST00000509043 EPHA2P29317 976 aa8.66□□□□□ -1.02
HTT-205ENST00000509043 ALDH4A1P30038 563 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms