RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 SYT11Q9BT88 431 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 ADAMTS10Q9H324 1103 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 C1orf198Q9H425 327 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 SORCS3Q9UPU3 1222 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 HHLA1C9JL84 531 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 E5RJQ4 531 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 H3BN98 237 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 SUPT3HO75486 399 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 GASTP01350 101 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 SRFP11831 508 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 LAP3P28838 519 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 TYK2P29597 1187 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 KPNA2P52292 529 aaKnown RBP7□□□□□ -1.29
PDGFRA-206ENST00000508170 HERV-K104P63124 156 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 SLC25A3Q00325 362 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 TIAL1Q01085 375 aaKnown RBP eCLIP7□□□□□ -1.29
PDGFRA-206ENST00000508170 SLC3A1Q07837 685 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 PON3Q15166 354 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 IMPG1Q17R60 797 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 TGIF2LXQ8IUE1 241 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 SPPL2CQ8IUH8 684 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 ZC3H3Q8IXZ2 948 aaKnown RBP7□□□□□ -1.29
PDGFRA-206ENST00000508170 ZNF100Q8IYN0 542 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 OR6X1Q8NH79 312 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 ASB5Q8WWX0 329 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 AP3S1Q92572 193 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 ALG3Q92685 438 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 MARK4Q96L34 752 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 C10orf90Q96M02 699 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 DDOQ99489 341 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 PRRT1Q99946 306 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 GSDMCQ9BYG8 508 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 SMYD3Q9H7B4 428 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 CTTNBP2NLQ9P2B4 639 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 FAM32AQ9Y421 112 aaKnown RBP7□□□□□ -1.29
PDGFRA-206ENST00000508170 ACTL7BQ9Y614 415 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 OAS3Q9Y6K5 1087 aaKnown RBP7□□□□□ -1.29
PDGFRA-206ENST00000508170 PRSS37A4D1T9 235 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 RFXANKO14593 260 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 GMDSO60547 372 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 AGFG2O95081 481 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 CLDN7O95471 211 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 OXSR1O95747 527 aaPredicted RBP7□□□□□ -1.29
PDGFRA-206ENST00000508170 FURINP09958 794 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 ATXN1LP0C7T5 689 aaKnown RBP7□□□□□ -1.29
PDGFRA-206ENST00000508170 UBCP0CG48 685 aaKnown RBP7□□□□□ -1.29
PDGFRA-206ENST00000508170 SMIM10L1P0DMW3 83 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 STX2P32856 288 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 ETV4P43268 484 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 ASCL1P50553 236 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 NAPAP54920 295 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 CLDN2P57739 230 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 PSME3P61289 254 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 MYL7Q01449 175 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 PKP1Q13835 747 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 CCNIQ14094 377 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 RTP5Q14D33 572 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 KNOP1Q1ED39 458 aaKnown RBP7□□□□□ -1.29
PDGFRA-206ENST00000508170 MTX3Q5HYI7 312 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 TEX30Q5JUR7 227 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 CERCAMQ5T4B2 595 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 SLC8B1Q6J4K2 584 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 FUT10Q6P4F1 479 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 OTOP2Q7RTS6 562 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 SLCO6A1Q86UG4 719 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 ANKRD46Q86W74 232 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 CMTM8Q8IZV2 173 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 ZFP82Q8N141 532 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 SREK1IP1Q8N9Q2 155 aaPredicted RBP7□□□□□ -1.29
PDGFRA-206ENST00000508170 SIDT2Q8NBJ9 832 aaKnown RBP7□□□□□ -1.29
PDGFRA-206ENST00000508170 ACBD4Q8NC06 268 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 CHDHQ8NE62 594 aaPredicted RBP7□□□□□ -1.29
PDGFRA-206ENST00000508170 SPPL2AQ8TCT8 520 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 PIH1D2Q8WWB5 315 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 DNAJB3Q8WWF6 145 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 SORCS1Q8WY21 1168 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 PIGTQ969N2 578 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 CMTM5Q96DZ9 223 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 PTCD3Q96EY7 689 aaKnown RBP7□□□□□ -1.29
PDGFRA-206ENST00000508170 STAMBPL1Q96FJ0 436 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 SMIM10Q96HG1 83 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 NSMCE3Q96MG7 304 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 DCBLD2Q96PD2 775 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 OR5B2Q96R09 309 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 C17orf62Q9BQA9 187 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 MCRIP2Q9BUT9 160 aaKnown RBP7□□□□□ -1.29
PDGFRA-206ENST00000508170 ACTL8Q9H568 366 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 CHMP1AQ9HD42 196 aaPredicted RBP7□□□□□ -1.29
PDGFRA-206ENST00000508170 HSFX1Q9UBD0 423 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 SLC25A13Q9UJS0 675 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 FAM96BQ9Y3D0 163 aa7□□□□□ -1.29
PDGFRA-206ENST00000508170 RIMS1Q86UR5 1692 aaKnown RBP7□□□□□ -1.29
PDGFRA-206ENST00000508170 DLG5Q8TDM6 1919 aa6.99□□□□□ -1.29
PDGFRA-206ENST00000508170 MON2Q7Z3U7 1717 aa6.99□□□□□ -1.29
PDGFRA-206ENST00000508170 PPIAL4EA0A075B759 164 aa6.99□□□□□ -1.29
PDGFRA-206ENST00000508170 SSU72P8A0A1W2PR75 194 aa6.99□□□□□ -1.29
PDGFRA-206ENST00000508170 SMIM23A6NLE4 172 aa6.99□□□□□ -1.29
PDGFRA-206ENST00000508170 OR2AT4A6NND4 320 aa6.99□□□□□ -1.29
PDGFRA-206ENST00000508170 RAB29O14966 203 aa6.99□□□□□ -1.29
PDGFRA-206ENST00000508170 SSX4O60224 188 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms