RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 SPTBP11277 2137 aa13.64□□□□□ -0.23
DDX41-208ENST00000507955 CKMT1AP12532 417 aa13.64□□□□□ -0.23
DDX41-208ENST00000507955 DRD2P14416 443 aa13.64□□□□□ -0.23
DDX41-208ENST00000507955 CDC42P60953 191 aa13.64□□□□□ -0.23
DDX41-208ENST00000507955 KCNJ8Q15842 424 aa13.64□□□□□ -0.23
DDX41-208ENST00000507955 MLIPQ5VWP3 458 aa13.64□□□□□ -0.23
DDX41-208ENST00000507955 MRM1Q6IN84 353 aaKnown RBP13.64□□□□□ -0.23
DDX41-208ENST00000507955 PGBD2Q6P3X8 592 aa13.64□□□□□ -0.23
DDX41-208ENST00000507955 VRK2Q86Y07 508 aa13.64□□□□□ -0.23
DDX41-208ENST00000507955 FCGR1BQ92637 280 aa13.64□□□□□ -0.23
DDX41-208ENST00000507955 MYDGFQ969H8 173 aa13.64□□□□□ -0.23
DDX41-208ENST00000507955 Q96MT0 163 aa13.64□□□□□ -0.23
DDX41-208ENST00000507955 FAIM2Q9BWQ8 316 aa13.64□□□□□ -0.23
DDX41-208ENST00000507955 CLEC2DQ9UHP7 191 aa13.64□□□□□ -0.23
DDX41-208ENST00000507955 POU2F3Q9UKI9 436 aa13.64□□□□□ -0.23
DDX41-208ENST00000507955 RBMX2Q9Y388 322 aaKnown RBP13.64□□□□□ -0.23
DDX41-208ENST00000507955 PCDHGA3Q9Y5H0 932 aa13.64□□□□□ -0.23
DDX41-208ENST00000507955 CFAP54Q96N23 3096 aa13.64□□□□□ -0.23
DDX41-208ENST00000507955 SDK1Q7Z5N4 2213 aa13.64□□□□□ -0.23
DDX41-208ENST00000507955 P2RX6O15547 441 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 PROM1O43490 865 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 CTSVO60911 334 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 PVRP15151 417 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 POLR2CP19387 275 aaPredicted RBP13.63□□□□□ -0.23
DDX41-208ENST00000507955 SERPINB1P30740 379 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 HOXD12P35452 270 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 CHRNEQ04844 493 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 DBPQ10586 325 aaPredicted RBP13.63□□□□□ -0.23
DDX41-208ENST00000507955 CDC20Q12834 499 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 DEFB134Q4QY38 66 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 ARMCX4Q5H9R4 360 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 DENND6BQ8NEG7 585 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 PHOX2BQ99453 314 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 UCK2Q9BZX2 261 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 NXF2Q9GZY0 626 aaKnown RBP13.63□□□□□ -0.23
DDX41-208ENST00000507955 TCEAL2Q9H3H9 227 aaPredicted RBP13.63□□□□□ -0.23
DDX41-208ENST00000507955 SRMSQ9H3Y6 488 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 CLDND1Q9NY35 253 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 LOC105369274A0A096LPK9 316 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 LOC102723532A0A0G2JNH3 316 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 APOL3O95236 402 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 ATXN8OSP0DMR3 200 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 F3P13726 295 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 NDUFV2P19404 249 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 CMPK1P30085 196 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 CSNK2BP67870 215 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 TUBA1BP68363 451 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 SIM1P81133 766 aaPredicted RBP13.63□□□□□ -0.23
DDX41-208ENST00000507955 MLLT1Q03111 559 aaPredicted RBP13.63□□□□□ -0.23
DDX41-208ENST00000507955 TMEM35AQ53FP2 167 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 ZNF425Q6IV72 752 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 SLC48A1Q6P1K1 146 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 FBXO42Q6P3S6 717 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 TUBA1AQ71U36 451 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 PRSS41Q7RTY9 318 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 ZER1Q7Z7L7 766 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 IQCHQ86VS3 1027 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 OR4N4Q8N0Y3 316 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 DEPDC4Q8N2C3 294 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 PARP16Q8N5Y8 322 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 POC5Q8NA72 575 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 CHCHD6Q9BRQ6 235 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 POLR2J3Q9H1A7 115 aaKnown RBP13.63□□□□□ -0.23
DDX41-208ENST00000507955 POLMQ9NP87 494 aaPredicted RBP13.63□□□□□ -0.23
DDX41-208ENST00000507955 MAN2C1Q9NTJ4 1040 aa13.63□□□□□ -0.23
DDX41-208ENST00000507955 WBP11Q9Y2W2 641 aaKnown RBP13.63□□□□□ -0.23
DDX41-208ENST00000507955 TDRD6O60522 2096 aaKnown RBP13.63□□□□□ -0.23
DDX41-208ENST00000507955 TLR4O00206 839 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 ZW10O43264 779 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 UGT2B17O75795 530 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 EIF2S1P05198 315 aaKnown RBP13.62□□□□□ -0.23
DDX41-208ENST00000507955 PRRT3Q5FWE3 981 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 ZNF362Q5T0B9 420 aaPredicted RBP13.62□□□□□ -0.23
DDX41-208ENST00000507955 FAM111BQ6SJ93 734 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 PAQR6Q6TCH4 344 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 USP43Q70EL4 1123 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 TCEANCQ8N8B7 351 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 TTLQ8NG68 377 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 RPLP0P6Q8NHW5 317 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 VPS13AQ96RL7 3174 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 CDCA3Q99618 268 aaPredicted RBP13.62□□□□□ -0.23
DDX41-208ENST00000507955 PITHD1Q9GZP4 211 aaPredicted RBP13.62□□□□□ -0.23
DDX41-208ENST00000507955 MRPS2Q9Y399 296 aaKnown RBP13.62□□□□□ -0.23
DDX41-208ENST00000507955 WDR87Q6ZQQ6 2873 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 DSPPQ9NZW4 1301 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 GSAPA4D1B5 854 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 ZIC2O95409 532 aaPredicted RBP13.62□□□□□ -0.23
DDX41-208ENST00000507955 TP53P04637 393 aaPredicted RBP13.62□□□□□ -0.23
DDX41-208ENST00000507955 RPLP0P05388 317 aaKnown RBP13.62□□□□□ -0.23
DDX41-208ENST00000507955 CELA2BP08218 269 aaPredicted RBP13.62□□□□□ -0.23
DDX41-208ENST00000507955 GSTT2P0CG29 244 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 GSTT2BP0CG30 244 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 ACADMP11310 421 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 OSMP13725 252 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 MMP11P24347 488 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 TEAD1P28347 426 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 RGS6P49758 472 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 XKP51811 444 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 MAP4K2Q12851 820 aa13.62□□□□□ -0.23
DDX41-208ENST00000507955 IRF3Q14653 427 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms