RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 ALDH9A1P49189 494 aa13.21□□□□□ -0.29
HMGCS1-203ENST00000507004 CRYZQ08257 329 aaKnown RBP13.21□□□□□ -0.29
HMGCS1-203ENST00000507004 PLCXD2Q0VAA5 305 aa13.21□□□□□ -0.29
HMGCS1-203ENST00000507004 ERCC6LQ2NKX8 1250 aa13.21□□□□□ -0.29
HMGCS1-203ENST00000507004 UNC50Q53HI1 259 aa13.21□□□□□ -0.29
HMGCS1-203ENST00000507004 UBAP2Q5T6F2 1119 aaKnown RBP13.21□□□□□ -0.29
HMGCS1-203ENST00000507004 GALNT18Q6P9A2 607 aa13.21□□□□□ -0.29
HMGCS1-203ENST00000507004 OR1J4Q8NGS1 313 aa13.21□□□□□ -0.29
HMGCS1-203ENST00000507004 DOK4Q8TEW6 326 aa13.21□□□□□ -0.29
HMGCS1-203ENST00000507004 UCN3Q969E3 161 aa13.21□□□□□ -0.29
HMGCS1-203ENST00000507004 PRDM14Q9GZV8 571 aa13.21□□□□□ -0.29
HMGCS1-203ENST00000507004 NXF5Q9H1B4 397 aaKnown RBP13.21□□□□□ -0.29
HMGCS1-203ENST00000507004 SLC6A15Q9H2J7 730 aa13.21□□□□□ -0.29
HMGCS1-203ENST00000507004 PFDN4Q9NQP4 134 aa13.21□□□□□ -0.29
HMGCS1-203ENST00000507004 FARSBQ9NSD9 589 aaKnown RBP13.21□□□□□ -0.29
HMGCS1-203ENST00000507004 TMEM216Q9P0N5 145 aa13.21□□□□□ -0.29
HMGCS1-203ENST00000507004 TNFRSF10DQ9UBN6 386 aa13.21□□□□□ -0.29
HMGCS1-203ENST00000507004 ZNF629Q9UEG4 869 aaPredicted RBP13.21□□□□□ -0.29
HMGCS1-203ENST00000507004 HCFC1P51610 2035 aa13.21□□□□□ -0.29
HMGCS1-203ENST00000507004 GNG14A0A1W2PPG7 69 aa13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 FRG2CA6NGY1 282 aa13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 OR6C70A6NIJ9 312 aa13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 CD8B2A6NJW9 211 aa13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 PCDH7O60245 1069 aa13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 DLX3O60479 287 aa13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 GLRA3O75311 464 aa13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 CBR3O75828 277 aa13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 ZWINTO95229 277 aa13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 MPIP34949 423 aa13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 KRT20P35900 424 aa13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 EEF1A1P68104 462 aaKnown RBP13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 MGAT2Q10469 447 aa13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 MYBPHQ13203 477 aa13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 EFR3AQ14156 821 aa13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 RCAN2Q14206 197 aa13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 FBXL19-AS1Q494R0 122 aa13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 EEF1A1P5Q5VTE0 462 aa13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 VASNQ6EMK4 673 aa13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 NTNG2Q96CW9 530 aa13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 OMA1Q96E52 524 aa13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 CNRIP1Q96F85 164 aaPredicted RBP13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 METTL2AQ96IZ6 378 aaKnown RBP13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 ZNF681Q96N22 645 aa13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 TMEM237Q96Q45 408 aa13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 TIMP4Q99727 224 aa13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 OSBPL11Q9BXB4 747 aa13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 ITPAQ9BY32 194 aa13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 ZNF225Q9UK10 706 aa13.2□□□□□ -0.3
HMGCS1-203ENST00000507004 A0A1W2PS29 197 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 SYT5O00445 386 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 PPP6CO00743 305 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 SNPHO15079 494 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 CBX7O95931 251 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 TSPAN8P19075 237 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 GCAP28676 217 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 PTPN6P29350 595 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 TIA1P31483 386 aaKnown RBP eCLIP13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 CEACAM8P31997 349 aaPredicted RBP13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 CCT5P48643 541 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 TRPC1P48995 793 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 ASCL1P50553 236 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 TOMM20Q15388 145 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 CEBPEQ15744 281 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 CCDC153Q494R4 210 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 ACSF3Q4G176 576 aaPredicted RBP13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 NSUN5P2Q63ZY6 315 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 FAM111BQ6SJ93 734 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 ENPP6Q6UWR7 440 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 ARSKQ6UWY0 536 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 TMEM64Q6YI46 380 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 WDR53Q7Z5U6 358 aaPredicted RBP13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 OR52R1Q8NGF1 315 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 FAM76AQ8TAV0 307 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 HGDQ93099 445 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 SLC35A4Q96G79 324 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 ZFP3Q96NJ6 502 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 CALHM2Q9HA72 323 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 HHATLQ9HCP6 504 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 KLRF1Q9NZS2 232 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 MID2Q9UJV3 735 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 GRID1Q9ULK0 1009 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 EXO1Q9UQ84 846 aaKnown RBP13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 DLGAP4Q9Y2H0 992 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 GPR55Q9Y2T6 319 aaPredicted RBP13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 PLLPQ9Y342 182 aa13.19□□□□□ -0.3
HMGCS1-203ENST00000507004 A0A1B0GTL3 188 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 PRAMEF25A6NGN4 478 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 PLOD3O60568 738 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 COQ9O75208 318 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 GOSR1O95249 250 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 IL18BPO95998 194 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 CD1EP15812 388 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 ADH7P40394 386 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 EMDP50402 254 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 SLC29A2Q14542 456 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 ZNF628Q5EBL2 1059 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 FNDC7Q5VTL7 733 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 ANGPTL8Q6UXH0 198 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 SPNS3Q6ZMD2 512 aa13.18□□□□□ -0.3
HMGCS1-203ENST00000507004 RPS27LQ71UM5 84 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms