RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 ACKR4Q9NPB9 350 aa9.59□□□□□ -0.87
NR1I3-222ENST00000506018 PFDN4Q9NQP4 134 aa9.59□□□□□ -0.87
NR1I3-222ENST00000506018 PNPLA3Q9NST1 481 aa9.59□□□□□ -0.87
NR1I3-222ENST00000506018 INTS9Q9NV88 658 aaKnown RBP9.59□□□□□ -0.87
NR1I3-222ENST00000506018 ALKBH4Q9NXW9 302 aa9.59□□□□□ -0.87
NR1I3-222ENST00000506018 TMEM216Q9P0N5 145 aa9.59□□□□□ -0.87
NR1I3-222ENST00000506018 PRODH2Q9UF12 536 aa9.59□□□□□ -0.87
NR1I3-222ENST00000506018 BCAP29Q9UHQ4 241 aa9.59□□□□□ -0.87
NR1I3-222ENST00000506018 MCM8Q9UJA3 840 aa9.59□□□□□ -0.87
NR1I3-222ENST00000506018 RNF6Q9Y252 685 aa9.59□□□□□ -0.87
NR1I3-222ENST00000506018 PCDHGB3Q9Y5G1 929 aa9.59□□□□□ -0.87
NR1I3-222ENST00000506018 NPFFR2Q9Y5X5 522 aa9.59□□□□□ -0.87
NR1I3-222ENST00000506018 CHCHD2Q9Y6H1 151 aaPredicted RBP9.59□□□□□ -0.87
NR1I3-222ENST00000506018 ABCA12Q86UK0 2595 aa9.59□□□□□ -0.87
NR1I3-222ENST00000506018 GNG14A0A1W2PPG7 69 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 WASHC1A8K0Z3 465 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 MANBAO00462 879 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 BIRC5O15392 142 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 CRCPO75575 148 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 BCAS2O75934 225 aaPredicted RBP9.58□□□□□ -0.88
NR1I3-222ENST00000506018 ATP1B1P05026 303 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 ENO1P06733 434 aaKnown RBP9.58□□□□□ -0.88
NR1I3-222ENST00000506018 MYL2P10916 166 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 DRD2P14416 443 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 CREB1P16220 341 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 NAGAP17050 411 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 TSPAN8P19075 237 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 ELAVL4P26378 380 aaKnown RBP9.58□□□□□ -0.88
NR1I3-222ENST00000506018 GDF1P27539 372 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 ZFP36L2P47974 494 aaKnown RBP9.58□□□□□ -0.88
NR1I3-222ENST00000506018 PKNOX1P55347 436 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 DCAF7P61962 342 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 ACSM2AQ08AH3 577 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 GALNT1Q10472 559 aaPredicted RBP9.58□□□□□ -0.88
NR1I3-222ENST00000506018 LCP2Q13094 533 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 HEPACAMQ14CZ8 416 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 C1orf185Q5T7R7 199 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 ACSM2BQ68CK6 577 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 LYPD8Q6UX82 237 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 HOMEZQ8IX15 550 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 CLYBLQ8N0X4 340 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 LRRC25Q8N386 305 aaPredicted RBP9.58□□□□□ -0.88
NR1I3-222ENST00000506018 C1orf52Q8N6N3 182 aaKnown RBP9.58□□□□□ -0.88
NR1I3-222ENST00000506018 LILRB4Q8NHJ6 448 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 PPP1R14CQ8TAE6 165 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 WNT2BQ93097 391 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 TM4SF18Q96CE8 201 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 HSPBAP1Q96EW2 488 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 C14orf79Q96F83 325 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 LRRC46Q96FV0 321 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 FAM111AQ96PZ2 611 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 PAIP2Q9BPZ3 127 aaKnown RBP9.58□□□□□ -0.88
NR1I3-222ENST00000506018 SHCBP1LQ9BZQ2 653 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 FARSBQ9NSD9 589 aaKnown RBP9.58□□□□□ -0.88
NR1I3-222ENST00000506018 FAM53CQ9NYF3 392 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 UTS2RQ9UKP6 389 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 LIPGQ9Y5X9 500 aa9.58□□□□□ -0.88
NR1I3-222ENST00000506018 FAM90A27PA6NNH2 459 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 C19orf84I3L1E1 186 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 ACOX3O15254 700 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 PCDH7O60245 1069 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 DLX3O60479 287 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 PLIN3O60664 434 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 TRAPPC6AO75865 159 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 SNUPNO95149 360 aaKnown RBP9.57□□□□□ -0.88
NR1I3-222ENST00000506018 SBK3P0C264 359 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 CPA3P15088 417 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 CHN1P15882 459 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 CAPN3P20807 821 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 FEN1P39748 380 aaKnown RBP9.57□□□□□ -0.88
NR1I3-222ENST00000506018 NUP107P57740 925 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 PSPHP78330 225 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 MAP4K2Q12851 820 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 TOMM20Q15388 145 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 PRICKLE4Q2TBC4 344 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 UNC50Q53HI1 259 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 EMC4Q5J8M3 183 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 ATG16L1Q676U5 607 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 RPS27LQ71UM5 84 aaKnown RBP9.57□□□□□ -0.88
NR1I3-222ENST00000506018 NUDCD3Q8IVD9 361 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 PM20D2Q8IYS1 436 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 TMEM151AQ8N4L1 468 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 MARVELD2Q8N4S9 558 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 ZNF615Q8N8J6 731 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 ZNF441Q8N8Z8 693 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 NEIL3Q8TAT5 605 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 RAB3IL1Q8TBN0 382 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 SPPL2AQ8TCT8 520 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 UCN3Q969E3 161 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 ADIPOR1Q96A54 375 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 ERP27Q96DN0 273 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 L3HYPDHQ96EM0 354 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 LURAP1Q96LR2 239 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 RILPQ96NA2 401 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 TMEM237Q96Q45 408 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 TTYH2Q9BSA4 534 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 TRIM8Q9BZR9 551 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 ENKD1Q9H0I2 346 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 METTL7AQ9H8H3 244 aa9.57□□□□□ -0.88
NR1I3-222ENST00000506018 CNOT11Q9UKZ1 510 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms