RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 FBXL16Q8N461 479 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 LRRC17Q8N6Y2 441 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 MLKLQ8NB16 471 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 KLHL30-AS1Q8NEE0 82 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 OR52J3Q8NH60 311 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 CRYGNQ8WXF5 182 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 PHYHIPQ92561 330 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 PIWIL1Q96J94 861 aaKnown RBP3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 RUFY1Q96T51 708 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 FAM173AQ9BQD7 235 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 APOOQ9BUR5 198 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 ALG9Q9H6U8 611 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 SYTL2Q9HCH5 934 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 ESM1Q9NQ30 184 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 ADAMTS9Q9P2N4 1935 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 PRODH2Q9UF12 536 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 KCNN3Q9UGI6 736 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 KLF2Q9Y5W3 355 aaPredicted RBP3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 SPAG9O60271 1321 aaKnown RBP3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 ZSCAN5CA6NGD5 496 aaPredicted RBP3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 ZBTB14O43829 449 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 IGHV3-9P01782 118 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 SLC4A1P02730 911 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 PGK2P07205 417 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 SNRPCP09234 159 aaKnown RBP3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 ZCCHC18P0CG32 403 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 TMOD1P28289 359 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 ATP6V1E1P36543 226 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 PAX2Q02962 417 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 AGKQ53H12 422 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 MS4A13Q5J8X5 152 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 MARC1Q5VT66 337 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 OR6B2Q6IFH4 312 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 STOX1Q6ZVD7 989 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 AMZ2Q86W34 360 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 GPD1LQ8N335 351 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 CD177Q8N6Q3 437 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 COLGALT1Q8NBJ5 622 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 OR4F17Q8NGA8 305 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 LHX4Q969G2 390 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 OR4F4Q96R69 305 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 TRIM9Q9C026 710 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 XPO4Q9C0E2 1151 aaKnown RBP3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 NACA2Q9H009 215 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 TSPY26PQ9H489 355 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 FAM124BQ9H5Z6 455 aaPredicted RBP3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 CENPMQ9NSP4 180 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 ANO10Q9NW15 660 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 FAM120CQ9NX05 1096 aaKnown RBP3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 RAI14Q9P0K7 980 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 ABCD2Q9UBJ2 740 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 IL19Q9UHD0 177 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 RSPH14Q9UHP6 348 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 NUDCQ9Y266 331 aa3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 RPH3AQ9Y2J0 694 aaPredicted RBP3.05□□□□□ -1.92
TOPBP1-204ENST00000505804 HTATSF1O43719 755 aaKnown RBP3.04□□□□□ -1.92
TOPBP1-204ENST00000505804 PRAMEF12O95522 483 aa3.04□□□□□ -1.92
TOPBP1-204ENST00000505804 WNT2P09544 360 aa3.04□□□□□ -1.92
TOPBP1-204ENST00000505804 CYP11B1P15538 503 aa3.04□□□□□ -1.92
TOPBP1-204ENST00000505804 ZNF85Q03923 595 aa3.04□□□□□ -1.92
TOPBP1-204ENST00000505804 NME3Q13232 169 aa3.04□□□□□ -1.92
TOPBP1-204ENST00000505804 ZNF699Q32M78 642 aa3.04□□□□□ -1.92
TOPBP1-204ENST00000505804 PLBD1Q6P4A8 553 aa3.04□□□□□ -1.92
TOPBP1-204ENST00000505804 BAIAP2L2Q6UXY1 529 aa3.04□□□□□ -1.92
TOPBP1-204ENST00000505804 MIER3Q7Z3K6 550 aa3.04□□□□□ -1.92
TOPBP1-204ENST00000505804 TAF8Q7Z7C8 310 aa3.04□□□□□ -1.92
TOPBP1-204ENST00000505804 CHCHD4Q8N4Q1 142 aa3.04□□□□□ -1.92
TOPBP1-204ENST00000505804 ZNF397Q8NF99 534 aaPredicted RBP3.04□□□□□ -1.92
TOPBP1-204ENST00000505804 CCDC51Q96ER9 411 aa3.04□□□□□ -1.92
TOPBP1-204ENST00000505804 FTHL17Q9BXU8 183 aa3.04□□□□□ -1.92
TOPBP1-204ENST00000505804 DBNDD1Q9H9R9 158 aa3.04□□□□□ -1.92
TOPBP1-204ENST00000505804 STARD5Q9NSY2 213 aa3.04□□□□□ -1.92
TOPBP1-204ENST00000505804 PRR34Q9NV39 138 aa3.04□□□□□ -1.92
TOPBP1-204ENST00000505804 MOSPD1Q9UJG1 213 aa3.04□□□□□ -1.92
TOPBP1-204ENST00000505804 VSIG4Q9Y279 399 aa3.04□□□□□ -1.92
TOPBP1-204ENST00000505804 ZNF646O15015 1829 aaPredicted RBP3.04□□□□□ -1.92
TOPBP1-204ENST00000505804 CFAP65Q6ZU64 1925 aaKnown RBP3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 CFAP73A6NFT4 308 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 EFCAB7A8K855 629 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 H3BMH7 237 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 ADAM12O43184 909 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 STK17BO94768 372 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 IGSF6O95976 241 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 IGKV3-15P01624 115 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 CXCL10P02778 98 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 HOXB7P09629 217 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 PVRP15151 417 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 IDSP22304 550 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 ACP1P24666 158 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 PTPN4P29074 926 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 PRDX6P30041 224 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 AKT2P31751 481 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 SFNP31947 248 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 HSPA1LP34931 641 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 SLC6A8P48029 635 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 NOP14P78316 857 aaKnown RBP3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 ZNF33BQ06732 778 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 WASHC5Q12768 1159 aa3.03□□□□□ -1.92
TOPBP1-204ENST00000505804 BNIP1Q12981 228 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms