RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 TDRD3Q9H7E2 651 aaKnown RBP5.96□□□□□ -1.45
CLCN3-204ENST00000504131 NRIP3Q9NQ35 241 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 MBNL1Q9NR56 388 aaKnown RBP5.96□□□□□ -1.45
CLCN3-204ENST00000504131 PGPEP1Q9NXJ5 209 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 CCDC167Q9P0B6 97 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 OPTCQ9UBM4 332 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 ANGEL1Q9UNK9 670 aaKnown RBP5.96□□□□□ -1.45
CLCN3-204ENST00000504131 ARL5AQ9Y689 179 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 CDC42BPGQ6DT37 1551 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 FAM237BA0A1B0GVD1 139 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 OR6C76A6NM76 312 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 DLEU1O43261 78 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 NDUFA2O43678 99 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 VPS26AO75436 327 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 ZMPSTE24O75844 475 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 NXPH2O95156 264 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 GALTP07902 379 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 PGAM1P18669 254 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 OR3A1P47881 315 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 KHKP50053 298 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 NUDT6P53370 316 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 EPHA4P54764 986 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 EMP3P54852 163 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 JAG1P78504 1218 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 ZBTB6Q15916 424 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 RFTN2Q52LD8 501 aaPredicted RBP5.96□□□□□ -1.45
CLCN3-204ENST00000504131 RNASEKQ6P5S7 137 aaKnown RBP5.96□□□□□ -1.45
CLCN3-204ENST00000504131 ACOT7LQ6ZUV0 252 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 FTMTQ8N4E7 242 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 HPSE2Q8WWQ2 592 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 PCDHGC4Q9Y5F7 938 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 NPTNQ9Y639 398 aa5.96□□□□□ -1.45
CLCN3-204ENST00000504131 USP6P35125 1406 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 PP2D1A8MPX8 630 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 AHRRA9YTQ3 701 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 H3BNH8 94 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 TRIM77I1YAP6 450 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 LGALS8O00214 317 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 SLC16A5O15375 505 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 ENTPD6O75354 484 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 RASAL1O95294 804 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 EGFP01133 1207 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 GP1BAP07359 652 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 SPP1P10451 314 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 ABCD3P28288 659 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 RFC3P40938 356 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 MMP13P45452 471 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 AQP5P55064 265 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 SLC17A1Q14916 467 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 CYP51A1Q16850 503 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 OTUD3Q5T2D3 398 aaPredicted RBP5.96□□□□□ -1.46
CLCN3-204ENST00000504131 TRAT1Q6PIZ9 186 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 SYT13Q7L8C5 426 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 FOXP4Q8IVH2 680 aaPredicted RBP5.96□□□□□ -1.46
CLCN3-204ENST00000504131 TMEM208Q9BTX3 173 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 DNAJC4Q9NNZ3 241 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 TRAPPC13A5PLN9 417 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 FABP12A6NFH5 140 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 MROH6A6NGR9 719 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 SLC17A3O00476 420 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 GPR39O43194 453 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 STAG3L1P0CL83 205 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 TBXA2RP21731 343 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 GABRA2P47869 451 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 UQCRFS1P47985 274 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 DHODHQ02127 395 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 ATAT1Q5SQI0 421 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 TSPAN33Q86UF1 283 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 SLC34A3Q8N130 599 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.96□□□□□ -1.46
CLCN3-204ENST00000504131 CDYL2Q8N8U2 506 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 SLC44A5Q8NCS7 719 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 ZNF548Q8NEK5 533 aaPredicted RBP5.96□□□□□ -1.46
CLCN3-204ENST00000504131 NRG4Q8WWG1 115 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 LRTOMTQ8WZ04 291 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 SLC30A2Q9BRI3 323 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 GPRC5CQ9NQ84 441 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 OR1A1Q9P1Q5 309 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 MARF1Q9Y4F3 1742 aaKnown RBP5.96□□□□□ -1.46
CLCN3-204ENST00000504131 ABCB7O75027 752 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 JCHAINP01591 159 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 HOXA7P31268 230 aaPredicted RBP5.96□□□□□ -1.46
CLCN3-204ENST00000504131 RPS5P46782 204 aaKnown RBP5.96□□□□□ -1.46
CLCN3-204ENST00000504131 SOX2P48431 317 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 HNRNPA3P51991 378 aaKnown RBP5.96□□□□□ -1.46
CLCN3-204ENST00000504131 EEFSECP57772 596 aaKnown RBP5.96□□□□□ -1.46
CLCN3-204ENST00000504131 ARHGAP1Q07960 439 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 GNMTQ14749 295 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 GPR33Q49SQ1 333 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 ZRANB3Q5FWF4 1079 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 LYSMD2Q8IV50 215 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 OR4F15Q8NGB8 312 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 OR2G2Q8NGZ5 317 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 DCAKDQ8WVC6 231 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 TP53RKQ96S44 253 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 SLC38A3Q99624 504 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 CHP1Q99653 195 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 TRMOQ9BU70 441 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 ALG8Q9BVK2 526 aa5.96□□□□□ -1.46
CLCN3-204ENST00000504131 MCOLN1Q9GZU1 580 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms