RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 PSME2Q9UL46 239 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 HS3ST3A1Q9Y663 406 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 HSPE1-MOB4S4R3N1 261 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 A0A1W2PR48 441 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 SNTNA6NMZ2 147 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 MAN2B1O00754 1011 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 AXIN1O15169 862 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 PRKRAO75569 313 aaKnown RBP10.92□□□□□ -0.66
USP46-204ENST00000503060 SLITRK5O94991 958 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 BCHEP06276 602 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 F3P13726 295 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 JUNBP17275 347 aaPredicted RBP10.92□□□□□ -0.66
USP46-204ENST00000503060 PCSK6P29122 969 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 BMP8BP34820 402 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 CDK5R2Q13319 367 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 NEDD8Q15843 81 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 PRRT3Q5FWE3 981 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 ZNF574Q6ZN55 896 aaPredicted RBP10.92□□□□□ -0.66
USP46-204ENST00000503060 STX12Q86Y82 276 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 NRROSQ86YC3 692 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 C10orf53Q8N6V4 93 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 SRFBP1Q8NEF9 429 aaKnown RBP10.92□□□□□ -0.66
USP46-204ENST00000503060 OR4C15Q8NGM1 316 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 GIPC3Q8TF64 312 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 FAM3CQ92520 227 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 RAB8BQ92930 207 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 TRNAU1APQ9NX07 287 aaKnown RBP10.92□□□□□ -0.66
USP46-204ENST00000503060 ATG4BQ9Y4P1 393 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 GMPPBQ9Y5P6 360 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 SNRNP200O75643 2136 aaKnown RBP10.91□□□□□ -0.66
USP46-204ENST00000503060 BRWD1Q9NSI6 2320 aa10.91□□□□□ -0.66
USP46-204ENST00000503060 WASHC1A8K0Z3 465 aa10.91□□□□□ -0.66
USP46-204ENST00000503060 C10orf142B7Z368 130 aa10.91□□□□□ -0.66
USP46-204ENST00000503060 SLC1A7O00341 560 aa10.91□□□□□ -0.66
USP46-204ENST00000503060 HMGN4O00479 90 aa10.91□□□□□ -0.66
USP46-204ENST00000503060 NARSO43776 548 aaKnown RBP10.91□□□□□ -0.66
USP46-204ENST00000503060 TFPTP0C1Z6 253 aa10.91□□□□□ -0.66
USP46-204ENST00000503060 CD72P21854 359 aa10.91□□□□□ -0.66
USP46-204ENST00000503060 CERS1P27544 350 aa10.91□□□□□ -0.66
USP46-204ENST00000503060 NTSP30990 170 aa10.91□□□□□ -0.66
USP46-204ENST00000503060 RAB8AP61006 207 aa10.91□□□□□ -0.66
USP46-204ENST00000503060 STXBP1P61764 594 aaKnown RBP10.91□□□□□ -0.66
USP46-204ENST00000503060 SPIBQ01892 262 aa10.91□□□□□ -0.66
USP46-204ENST00000503060 TP53BP2Q13625 1128 aa10.91□□□□□ -0.66
USP46-204ENST00000503060 ZNF674Q2M3X9 581 aa10.91□□□□□ -0.66
USP46-204ENST00000503060 Q6ZSR6 202 aa10.91□□□□□ -0.66
USP46-204ENST00000503060 ARL14Q8N4G2 192 aa10.91□□□□□ -0.66
USP46-204ENST00000503060 ZNF321PQ8N8H1 164 aa10.91□□□□□ -0.66
USP46-204ENST00000503060 ZNF566Q969W8 418 aa10.91□□□□□ -0.66
USP46-204ENST00000503060 ISOC1Q96CN7 298 aa10.91□□□□□ -0.66
USP46-204ENST00000503060 TMEM19Q96HH6 336 aa10.91□□□□□ -0.66
USP46-204ENST00000503060 SGCZQ96LD1 299 aa10.91□□□□□ -0.66
USP46-204ENST00000503060 BBS4Q96RK4 519 aa10.91□□□□□ -0.66
USP46-204ENST00000503060 ZSCAN32Q9NX65 697 aa10.91□□□□□ -0.66
USP46-204ENST00000503060 USP36Q9P275 1121 aaKnown RBP10.91□□□□□ -0.66
USP46-204ENST00000503060 FBXW2Q9UKT8 454 aa10.91□□□□□ -0.66
USP46-204ENST00000503060 NDRG4Q9ULP0 352 aaKnown RBP10.91□□□□□ -0.66
USP46-204ENST00000503060 SH3D21A4FU49 640 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 GLOD5A6NK44 160 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 ZNF701M0R085 212 aaPredicted RBP10.9□□□□□ -0.66
USP46-204ENST00000503060 PGRMC2O15173 223 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 TRMUO75648 421 aaKnown RBP10.9□□□□□ -0.66
USP46-204ENST00000503060 DNAJB5O75953 348 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 AIFM1O95831 613 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 ASGR2P07307 311 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 HTR1AP08908 422 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 EPHA2P29317 976 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 GPC1P35052 558 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 TSFMP43897 325 aaKnown RBP10.9□□□□□ -0.66
USP46-204ENST00000503060 XCR1P46094 333 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 GDI2P50395 445 aaKnown RBP10.9□□□□□ -0.66
USP46-204ENST00000503060 NCBP2P52298 156 aaKnown RBP eCLIP10.9□□□□□ -0.66
USP46-204ENST00000503060 CDH12P55289 794 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 RPS15AP62244 130 aaKnown RBP10.9□□□□□ -0.66
USP46-204ENST00000503060 MAPK11Q15759 364 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 C1orf185Q5T7R7 199 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 VN1R4Q7Z5H5 301 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 CARFQ8N187 725 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 FLVCR1-AS1Q8TAF5 88 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 CNIH3Q8TBE1 160 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 NINJ1Q92982 152 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 SLC22A18Q96BI1 424 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 SLC35G5Q96KT7 338 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 DACH2Q96NX9 599 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 PITX2Q99697 317 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 APOL4Q9BPW4 351 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 TWSG1Q9GZX9 223 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 C6orf106Q9H6K1 298 aaPredicted RBP10.9□□□□□ -0.66
USP46-204ENST00000503060 RPH3AQ9Y2J0 694 aaPredicted RBP10.9□□□□□ -0.66
USP46-204ENST00000503060 ZNF451Q9Y4E5 1061 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 ENPP4Q9Y6X5 453 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 E9PQ18 207 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 ERAL1O75616 437 aaKnown RBP10.9□□□□□ -0.66
USP46-204ENST00000503060 ANXA8P13928 327 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 CD247P20963 164 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 FOXK2Q01167 660 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 TGM3Q08188 693 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 NPRL3Q12980 569 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 ERV3-1Q14264 604 aa10.9□□□□□ -0.66
USP46-204ENST00000503060 KIR2DS3Q14952 304 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms