RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 ROBO4Q8WZ75 1007 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 INTS12Q96CB8 462 aaKnown RBP8.44□□□□□ -1.06
FN1-227ENST00000498719 ERLEC1Q96DZ1 483 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 SH3YL1Q96HL8 342 aaPredicted RBP8.44□□□□□ -1.06
FN1-227ENST00000498719 LMLNQ96KR4 655 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 MRGPRX4Q96LA9 322 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 ZNF558Q96NG5 402 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 OR4K3Q96R72 315 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 SLC46A2Q9BY10 475 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 DPH1Q9BZG8 443 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 SDHAF3Q9NRP4 125 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 EHD3Q9NZN3 535 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 ANKMY1Q9P2S6 941 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 VPS29Q9UBQ0 182 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 PRSS50Q9UI38 385 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 HS3ST2Q9Y278 367 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 AP3M1Q9Y2T2 418 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 FUOMA2VDF0 154 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 GABRR3A8MPY1 467 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 FADS2P1A8MWK0 482 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 SULT1C4O75897 302 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 ARHGEF15O94989 841 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 IGHEP01854 428 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 MT-ND2P03891 347 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 GBAP04062 536 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 SEMG1P04279 462 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 CD3EP07766 207 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 GPX2P18283 190 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 PRKACBP22694 351 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 PSMB9P28065 219 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 CCR2P41597 374 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 CTSCP53634 463 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 SOX8P57073 446 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 NCS1P62166 190 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 TOP3AQ13472 1001 aaPredicted RBP8.44□□□□□ -1.06
FN1-227ENST00000498719 GAB1Q13480 694 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 NAE1Q13564 534 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 HKDC1Q2TB90 917 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 RFX4Q33E94 735 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 CDKL4Q5MAI5 379 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 TMEM236Q5W0B7 351 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 CAPN13Q6MZZ7 669 aaPredicted RBP8.44□□□□□ -1.06
FN1-227ENST00000498719 SLCO6A1Q86UG4 719 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 THOC6Q86W42 341 aaKnown RBP8.44□□□□□ -1.06
FN1-227ENST00000498719 HORMAD1Q86X24 394 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 TMC8Q8IU68 726 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 CPXM2Q8N436 756 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 C1orf52Q8N6N3 182 aaKnown RBP8.44□□□□□ -1.06
FN1-227ENST00000498719 WDR20Q8TBZ3 569 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 ZFP90Q8TF47 636 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 RORBQ92753 470 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 RPL3LQ92901 407 aaKnown RBP8.44□□□□□ -1.06
FN1-227ENST00000498719 INSM2Q96T92 566 aaPredicted RBP8.44□□□□□ -1.06
FN1-227ENST00000498719 CORO1BQ9BR76 489 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 RUBCNLQ9H714 662 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 TPT1P8Q9HAU6 139 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 TMEM184CQ9NVA4 438 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 THUMPD1Q9NXG2 353 aaKnown RBP8.44□□□□□ -1.06
FN1-227ENST00000498719 ERGIC3Q9Y282 383 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 PPIL1Q9Y3C6 166 aa8.44□□□□□ -1.06
FN1-227ENST00000498719 NOTCH4Q99466 2003 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 ADAMDEC1O15204 470 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 OPN1SWP03999 348 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 STAG3L3P0CL85 134 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 ZNF12P17014 697 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 HNRNPA2B1P22626 353 aaKnown RBP8.43□□□□□ -1.06
FN1-227ENST00000498719 BDKRB1P46663 353 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 ARHGDIAP52565 204 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 RAE1P78406 368 aaKnown RBP8.43□□□□□ -1.06
FN1-227ENST00000498719 CD300CQ08708 224 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 ACSM2AQ08AH3 577 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 IL11RAQ14626 422 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.43□□□□□ -1.06
FN1-227ENST00000498719 ACSM2BQ68CK6 577 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 HEPHL1Q6MZM0 1159 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 TCAIMQ8N3R3 496 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 ZNF366Q8N895 744 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 OR2A12Q8NGT7 310 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 CHPT1Q8WUD6 406 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 DUSP21Q9H596 190 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 AMBNQ9NP70 447 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 FZD4Q9ULV1 537 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 PMF1-BGLAPU3KQ54 211 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 OR2A25A4D2G3 310 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 NDUFS8O00217 210 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 PCDH7O60245 1069 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 CBFA2T3O75081 653 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 WBP4O75554 376 aaKnown RBP8.43□□□□□ -1.06
FN1-227ENST00000498719 SLC16A8O95907 504 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 EIF2S1P05198 315 aaKnown RBP8.43□□□□□ -1.06
FN1-227ENST00000498719 LCKP06239 509 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 GLAP06280 429 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 FPR1P21462 350 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 EPHA1P21709 976 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 ACVR2AP27037 513 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 PDHA2P29803 388 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 KIAA1024LP59773 190 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 SLC7A9P82251 487 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 IFITM3Q01628 133 aa8.43□□□□□ -1.06
FN1-227ENST00000498719 MVKQ03426 396 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms