RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 ACSL4O60488 711 aa0.78□□□□□ -2.28
SGMS1-205ENST00000498514 TBX10O75333 385 aa0.78□□□□□ -2.28
SGMS1-205ENST00000498514 CLN5O75503 358 aa0.78□□□□□ -2.28
SGMS1-205ENST00000498514 BBOX1O75936 387 aa0.78□□□□□ -2.28
SGMS1-205ENST00000498514 ADRA2CP18825 462 aa0.78□□□□□ -2.28
SGMS1-205ENST00000498514 IGHV1-2P23083 117 aa0.78□□□□□ -2.28
SGMS1-205ENST00000498514 PSMA3P25788 255 aa0.78□□□□□ -2.28
SGMS1-205ENST00000498514 NUDT1P36639 197 aa0.78□□□□□ -2.28
SGMS1-205ENST00000498514 RAB28P51157 221 aa0.78□□□□□ -2.28
SGMS1-205ENST00000498514 NUP107P57740 925 aa0.78□□□□□ -2.28
SGMS1-205ENST00000498514 EOGTQ5NDL2 527 aa0.78□□□□□ -2.28
SGMS1-205ENST00000498514 TRPM8Q7Z2W7 1104 aa0.78□□□□□ -2.28
SGMS1-205ENST00000498514 HSD17B13Q7Z5P4 300 aaPredicted RBP0.78□□□□□ -2.28
SGMS1-205ENST00000498514 TDHQ8IZJ6 230 aa0.78□□□□□ -2.28
SGMS1-205ENST00000498514 MYDGFQ969H8 173 aa0.78□□□□□ -2.28
SGMS1-205ENST00000498514 EVI5LQ96CN4 794 aa0.78□□□□□ -2.28
SGMS1-205ENST00000498514 CARD9Q9H257 536 aa0.78□□□□□ -2.28
SGMS1-205ENST00000498514 NXF3Q9H4D5 531 aaKnown RBP0.78□□□□□ -2.28
SGMS1-205ENST00000498514 ZNF665Q9H7R5 613 aa0.78□□□□□ -2.28
SGMS1-205ENST00000498514 Q9HAA7 133 aa0.78□□□□□ -2.28
SGMS1-205ENST00000498514 RAB9BQ9NP90 201 aa0.78□□□□□ -2.28
SGMS1-205ENST00000498514 NOCTQ9UK39 431 aaKnown RBP0.78□□□□□ -2.28
SGMS1-205ENST00000498514 RNF115Q9Y4L5 304 aa0.78□□□□□ -2.28
SGMS1-205ENST00000498514 FAT4Q6V0I7 4981 aa0.78□□□□□ -2.28
SGMS1-205ENST00000498514 PRKDCP78527 4128 aaKnown RBP0.78□□□□□ -2.28
SGMS1-205ENST00000498514 GVINP1Q7Z2Y8 2422 aa0.78□□□□□ -2.28
SGMS1-205ENST00000498514 EPRSP07814 1512 aaKnown RBP0.78□□□□□ -2.28
SGMS1-205ENST00000498514 NEBP20929 6669 aa0.78□□□□□ -2.28
SGMS1-205ENST00000498514 KDM5CP41229 1560 aa0.78□□□□□ -2.29
SGMS1-205ENST00000498514 TENM2Q9NT68 2774 aa0.78□□□□□ -2.29
SGMS1-205ENST00000498514 DYNC2H1Q8NCM8 4307 aaKnown RBP0.78□□□□□ -2.29
SGMS1-205ENST00000498514 CNOT1A5YKK6 2376 aaKnown RBP0.77□□□□□ -2.29
SGMS1-205ENST00000498514 FN1P02751 2386 aaKnown RBP0.77□□□□□ -2.29
SGMS1-205ENST00000498514 LRRK2Q5S007 2527 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 TLN1Q9Y490 2541 aaKnown RBP0.77□□□□□ -2.29
SGMS1-205ENST00000498514 CUBNO60494 3623 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 LRRD1A4D1F6 860 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 NBR2O15453 112 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 RBBP9O75884 186 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 ANXA9O76027 345 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 BEST1O76090 585 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 PNMTP11086 282 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 TCF4P15884 667 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 CCNCP24863 283 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 LONP1P36776 959 aaKnown RBP0.77□□□□□ -2.29
SGMS1-205ENST00000498514 ACVR1BP36896 505 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 MTIF2P46199 727 aaKnown RBP0.77□□□□□ -2.29
SGMS1-205ENST00000498514 OR1D4P47884 311 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 ALDH3B2P48448 385 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 UCP2P55851 309 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 KRTAP6-3Q3LI67 103 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 LBHQ53QV2 105 aaPredicted RBP0.77□□□□□ -2.29
SGMS1-205ENST00000498514 WDR78Q5VTH9 848 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 TAF3Q5VWG9 929 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 CAPN13Q6MZZ7 669 aaPredicted RBP0.77□□□□□ -2.29
SGMS1-205ENST00000498514 MOB2Q70IA6 237 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 FAM219AQ8IW50 185 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 RELL2Q8NC24 303 aaPredicted RBP0.77□□□□□ -2.29
SGMS1-205ENST00000498514 SPATA18Q8TC71 538 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 RDH5Q92781 318 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 TREX2Q9BQ50 279 aaPredicted RBP0.77□□□□□ -2.29
SGMS1-205ENST00000498514 CHCHD6Q9BRQ6 235 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 CNPY3Q9BT09 278 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 POLR3GLQ9BT43 218 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 PLA2G2FQ9BZM2 168 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 OPN3Q9H1Y3 402 aaPredicted RBP0.77□□□□□ -2.29
SGMS1-205ENST00000498514 MARCOQ9UEW3 520 aaPredicted RBP0.77□□□□□ -2.29
SGMS1-205ENST00000498514 PCDHGB4Q9UN71 923 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 SCML2Q9UQR0 700 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 ETV7Q9Y603 341 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 URB2Q14146 1524 aaKnown RBP0.77□□□□□ -2.29
SGMS1-205ENST00000498514 RNF213Q63HN8 5207 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 RLFQ13129 1914 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 MTCL1Q9Y4B5 1905 aaKnown RBP0.77□□□□□ -2.29
SGMS1-205ENST00000498514 CCDC168Q8NDH2 2452 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 LAMA1P25391 3075 aa0.77□□□□□ -2.29
SGMS1-205ENST00000498514 RIF1Q5UIP0 2472 aaKnown RBP0.76□□□□□ -2.29
SGMS1-205ENST00000498514 XIRP1Q702N8 1843 aaKnown RBP0.76□□□□□ -2.29
SGMS1-205ENST00000498514 NRKQ7Z2Y5 1582 aa0.76□□□□□ -2.29
SGMS1-205ENST00000498514 NCOA1Q15788 1441 aa0.76□□□□□ -2.29
SGMS1-205ENST00000498514 ARID4BQ4LE39 1312 aaPredicted RBP0.76□□□□□ -2.29
SGMS1-205ENST00000498514 A0A0B4J203 849 aa0.76□□□□□ -2.29
SGMS1-205ENST00000498514 A6NDX4 124 aa0.76□□□□□ -2.29
SGMS1-205ENST00000498514 LCMT2O60294 686 aaKnown RBP0.76□□□□□ -2.29
SGMS1-205ENST00000498514 PSMD10O75832 226 aa0.76□□□□□ -2.29
SGMS1-205ENST00000498514 SLU7O95391 586 aaKnown RBP0.76□□□□□ -2.29
SGMS1-205ENST00000498514 MMP1P03956 469 aa0.76□□□□□ -2.29
SGMS1-205ENST00000498514 IGHV4-34P06331 123 aa0.76□□□□□ -2.29
SGMS1-205ENST00000498514 PORP16435 677 aaPredicted RBP0.76□□□□□ -2.29
SGMS1-205ENST00000498514 IGFBP3P17936 291 aaPredicted RBP0.76□□□□□ -2.29
SGMS1-205ENST00000498514 HOXD10P28358 340 aa0.76□□□□□ -2.29
SGMS1-205ENST00000498514 GMPSP49915 693 aaPredicted RBP0.76□□□□□ -2.29
SGMS1-205ENST00000498514 BCL2L1Q07817 233 aa0.76□□□□□ -2.29
SGMS1-205ENST00000498514 SLAQ13239 276 aa0.76□□□□□ -2.29
SGMS1-205ENST00000498514 ELAVL3Q14576 367 aaKnown RBP0.76□□□□□ -2.29
SGMS1-205ENST00000498514 KRT31Q15323 416 aa0.76□□□□□ -2.29
SGMS1-205ENST00000498514 KRTAP13-2Q52LG2 175 aa0.76□□□□□ -2.29
SGMS1-205ENST00000498514 DCAF12Q5T6F0 453 aa0.76□□□□□ -2.29
SGMS1-205ENST00000498514 SEL1L2Q5TEA6 688 aa0.76□□□□□ -2.29
SGMS1-205ENST00000498514 FAM180BQ6P0A1 224 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms