RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 OR7G3Q8NG95 312 aa10.55□□□□□ -0.72
CDK9-205ENST00000498339 ADIPOR1Q96A54 375 aa10.55□□□□□ -0.72
CDK9-205ENST00000498339 MS4A14Q96JA4 679 aa10.55□□□□□ -0.72
CDK9-205ENST00000498339 MARK4Q96L34 752 aa10.55□□□□□ -0.72
CDK9-205ENST00000498339 MTERF1Q99551 399 aaKnown RBP10.55□□□□□ -0.72
CDK9-205ENST00000498339 REG4Q9BYZ8 158 aa10.55□□□□□ -0.72
CDK9-205ENST00000498339 DERL2Q9GZP9 239 aa10.55□□□□□ -0.72
CDK9-205ENST00000498339 NXF5Q9H1B4 397 aaKnown RBP10.55□□□□□ -0.72
CDK9-205ENST00000498339 CXorf21Q9HAI6 301 aa10.55□□□□□ -0.72
CDK9-205ENST00000498339 ZNF701Q9NV72 531 aaPredicted RBP10.55□□□□□ -0.72
CDK9-205ENST00000498339 PSD3Q9NYI0 1048 aa10.55□□□□□ -0.72
CDK9-205ENST00000498339 BCAP29Q9UHQ4 241 aa10.55□□□□□ -0.72
CDK9-205ENST00000498339 PTBP2Q9UKA9 531 aaKnown RBP10.55□□□□□ -0.72
CDK9-205ENST00000498339 RNF112Q9ULX5 631 aa10.55□□□□□ -0.72
CDK9-205ENST00000498339 A0A1W2PR48 441 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 A0A1W2PS29 197 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 DNALI1O14645 258 aaPredicted RBP10.54□□□□□ -0.72
CDK9-205ENST00000498339 HS3ST1O14792 307 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 HCRTR2O43614 444 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 ABCB7O75027 752 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 EEDO75530 441 aaKnown RBP10.54□□□□□ -0.72
CDK9-205ENST00000498339 ZNF708P17019 499 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 GPX3P22352 226 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 LOXP28300 417 aaPredicted RBP10.54□□□□□ -0.72
CDK9-205ENST00000498339 SRD5A2P31213 254 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 GGT5P36269 586 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 ELK3P41970 407 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 CASP2P42575 452 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 NEK2P51955 445 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 GFRA1P56159 465 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 CLDN18P56856 261 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 FUT7Q11130 342 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 CAPRIN1Q14444 709 aaKnown RBP10.54□□□□□ -0.72
CDK9-205ENST00000498339 ALKBH2Q6NS38 261 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 NUP54Q7Z3B4 507 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 PLCZ1Q86YW0 608 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 LAS2Q8IYD9 372 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 PDIK1LQ8N165 341 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 ZNF615Q8N8J6 731 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 C17orf47Q8NEP4 570 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 TRIM58Q8NG06 486 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 HUS1BQ8NHY5 278 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 HGDQ93099 445 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 CAVIN3Q969G5 261 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 GTPBP3Q969Y2 492 aaKnown RBP10.54□□□□□ -0.72
CDK9-205ENST00000498339 CTHRC1Q96CG8 243 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 ZBED6CLQ96FA7 236 aaPredicted RBP10.54□□□□□ -0.72
CDK9-205ENST00000498339 TRMT61AQ96FX7 289 aaKnown RBP10.54□□□□□ -0.72
CDK9-205ENST00000498339 PLPPR2Q96GM1 343 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 ITPAQ9BY32 194 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 BRINP2Q9C0B6 783 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 AMBRA1Q9C0C7 1298 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 POPDC3Q9HBV1 291 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 HEY2Q9UBP5 337 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 PROCRQ9UNN8 238 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 DTX4Q9Y2E6 619 aa10.54□□□□□ -0.72
CDK9-205ENST00000498339 GOLGA6L10A0A0M3HER8 536 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 EFCAB8A8MWE9 144 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 SUPT3HB4E1H0 165 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 SEC14L5O43304 696 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 TMPRSS11DO60235 418 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 TMCC2O75069 709 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 UGT2B11O75310 529 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 SUPT3HO75486 399 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 SOX30O94993 753 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 PLAUP00749 431 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 GBAP04062 536 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 FAM58BPP0C7Q3 252 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 CCDC166P0CW27 439 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 EPORP19235 508 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 TBXA2RP21731 343 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 IDUAP35475 653 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 PTGDSP41222 190 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 KIR2DL2P43627 348 aaPredicted RBP10.53□□□□□ -0.72
CDK9-205ENST00000498339 PCYT1AP49585 367 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 MGAT5Q09328 741 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 SNTA1Q13424 505 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 FGFBP1Q14512 234 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 OR4D1Q15615 310 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 ETFDHQ16134 617 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 OR5M10Q6IEU7 315 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 GRHL2Q6ISB3 625 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 NUDT13Q86X67 352 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 WFDC8Q8IUA0 241 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 ANKMY2Q8IV38 441 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 ZNF611Q8N823 705 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 WDSUB1Q8N9V3 476 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 ZNF610Q8N9Z0 462 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 PDPRQ8NCN5 879 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 OR7G1Q8NGA0 311 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 AKAP1Q92667 903 aaKnown RBP eCLIP10.53□□□□□ -0.72
CDK9-205ENST00000498339 NAP1L3Q99457 506 aaPredicted RBP10.53□□□□□ -0.72
CDK9-205ENST00000498339 PINK1Q9BXM7 581 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 CD244Q9BZW8 370 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 CAB39LQ9H9S4 337 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 PLAC1Q9HBJ0 212 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 OPTCQ9UBM4 332 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 FBXL2Q9UKC9 423 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 CFL2Q9Y281 166 aa10.53□□□□□ -0.72
CDK9-205ENST00000498339 ASB4Q9Y574 426 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms