RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 MRTO4Q9UKD2 239 aaKnown RBP16.32■□□□□ 0.2
CTDSP1-215ENST00000498160 URB1O60287 2271 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 C2orf92A0A1B0GVN3 265 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 EBAG9O00559 213 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 FBP2O00757 339 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 ASNA1O43681 348 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 AK1P00568 194 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 ITGB2P05107 769 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 DRD5P21918 477 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 ITGA3P26006 1051 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 PPICP45877 212 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 KHKP50053 298 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 EMDP50402 254 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 PRKAG1P54619 331 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 EXOSC7Q15024 291 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 EBPQ15125 230 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 DEFB109BQ30KR1 87 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 CRB2Q5IJ48 1285 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 H3F3CQ6NXT2 135 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 CDC73Q6P1J9 531 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 C6orf120Q7Z4R8 191 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 RETREG3Q86VR2 466 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 TAGAPQ8N103 731 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 GALNT16Q8N428 558 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 POU5F2Q8N7G0 328 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 OR8J3Q8NGG0 315 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 SLC22A8Q8TCC7 542 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 ZFP90Q8TF47 636 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 HOXB13Q92826 284 aaPredicted RBP16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 LRRC58Q96CX6 371 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 RCN3Q96D15 328 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 THOC3Q96J01 351 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 MAGED4Q96JG8 741 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 ZNF354BQ96LW1 612 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 BTBD9Q96Q07 612 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 CGREF1Q99674 301 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 LMF2Q9BU23 707 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 WWTR1Q9GZV5 400 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 TPT1P8Q9HAU6 139 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 FOLH1BQ9HBA9 442 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 DUSP22Q9NRW4 184 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 PCDHB14Q9Y5E9 798 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 WDFY3Q8IZQ1 3526 aa16.31■□□□□ 0.2
CTDSP1-215ENST00000498160 TRBV5-3A0A0A0MS03 114 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 TMEM247A6NEH6 219 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 FRG2CA6NGY1 282 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 TAF4O00268 1085 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 CLIC1O00299 241 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 AIM2O14862 343 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 CLPSP04118 112 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 ALPPP05187 535 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 HMGN2P05204 90 aaKnown RBP16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 ALOX5P09917 674 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 PTPN6P29350 595 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 SOX18P35713 384 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 CDKN2CP42773 168 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 TMED10P49755 219 aaKnown RBP16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 RASSF2P50749 326 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 PSMD4P55036 377 aaKnown RBP16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 GAB1Q13480 694 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 MEP1AQ16819 746 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 MFSD12Q6NUT3 480 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 BORAQ6PGQ7 559 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 C16orf89Q6UX73 402 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 ANGPTL8Q6UXH0 198 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 DLEU7Q6UYE1 221 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 DNAJC14Q6Y2X3 702 aaPredicted RBP16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 C9orf40Q8IXQ3 194 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 OR52N2Q8NGI0 321 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 ADAMTS15Q8TE58 950 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 LCORQ96JN0 433 aaPredicted RBP16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 VSTM2LQ96N03 204 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 ANKRD27Q96NW4 1050 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 SPATA9Q9BWV2 254 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 TRIM4Q9C037 500 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 Q9N2J8 555 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 ARL8BQ9NVJ2 186 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 MAP10Q9P2G4 905 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 KCNMB2Q9Y691 235 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 AKAP13Q12802 2813 aa16.3■□□□□ 0.2
CTDSP1-215ENST00000498160 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.29■□□□□ 0.2
CTDSP1-215ENST00000498160 HRKO00198 91 aa16.29■□□□□ 0.2
CTDSP1-215ENST00000498160 GSNP06396 782 aa16.29■□□□□ 0.2
CTDSP1-215ENST00000498160 ITGAMP11215 1152 aa16.29■□□□□ 0.2
CTDSP1-215ENST00000498160 HOXB9P17482 250 aaPredicted RBP16.29■□□□□ 0.2
CTDSP1-215ENST00000498160 MATN1P21941 496 aa16.29■□□□□ 0.2
CTDSP1-215ENST00000498160 NUDT2P50583 147 aa16.29■□□□□ 0.2
CTDSP1-215ENST00000498160 MRPS22P82650 360 aaKnown RBP16.29■□□□□ 0.2
CTDSP1-215ENST00000498160 MXRA7P84157 204 aa16.29■□□□□ 0.2
CTDSP1-215ENST00000498160 GNA13Q14344 377 aa16.29■□□□□ 0.2
CTDSP1-215ENST00000498160 CYP27C1Q4G0S4 372 aa16.29■□□□□ 0.2
CTDSP1-215ENST00000498160 RUNDC3AQ59EK9 446 aa16.29■□□□□ 0.2
CTDSP1-215ENST00000498160 ATAD3BQ5T9A4 648 aa16.29■□□□□ 0.2
CTDSP1-215ENST00000498160 ATP1A1-AS1Q5TC04 95 aa16.29■□□□□ 0.2
CTDSP1-215ENST00000498160 RPS19BP1Q86WX3 136 aaKnown RBP16.29■□□□□ 0.2
CTDSP1-215ENST00000498160 GPALPP1Q8IXQ4 340 aa16.29■□□□□ 0.2
CTDSP1-215ENST00000498160 OR5AK3PQ8NH89 298 aa16.29■□□□□ 0.2
CTDSP1-215ENST00000498160 GIMAP5Q96F15 307 aa16.29■□□□□ 0.2
CTDSP1-215ENST00000498160 GAL3ST4Q96RP7 486 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms