RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 PDE5AO76074 875 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 OAS1P00973 400 aaKnown RBP2.35□□□□□ -2.03
SMC4-227ENST00000497984 APRTP07741 180 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 SLC35E2P0CK97 266 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 GLULP15104 373 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 ZP3P21754 424 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 P2RY4P51582 365 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 ZNF131P52739 623 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 WNT4P56705 351 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 ZNF85Q03923 595 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 ASAH1Q13510 395 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 EPC2Q52LR7 807 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 Q6P435 159 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 ATRAIDQ6UW56 229 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 B3GLCTQ6Y288 498 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 PIWIL3Q7Z3Z3 882 aaKnown RBP2.35□□□□□ -2.03
SMC4-227ENST00000497984 SLC22A16Q86VW1 577 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 FBXO16Q8IX29 292 aaPredicted RBP2.35□□□□□ -2.03
SMC4-227ENST00000497984 ENTHD1Q8IYW4 607 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 CHCHD4Q8N4Q1 142 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 RAB39BQ96DA2 213 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 MRPL53Q96EL3 112 aaKnown RBP2.35□□□□□ -2.03
SMC4-227ENST00000497984 VSIG2Q96IQ7 327 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 GPR137Q96N19 417 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 C19orf24Q9BVV8 132 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 PRODH2Q9UF12 536 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 APOBEC3BQ9UH17 382 aaKnown RBP2.35□□□□□ -2.03
SMC4-227ENST00000497984 MEGF6O75095 1541 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 A0A1W2PRQ8 180 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 ZFP92A6NM28 416 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 K7ERI5 159 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 SLC7A4O43246 635 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 LCMT2O60294 686 aaKnown RBP2.34□□□□□ -2.03
SMC4-227ENST00000497984 SERF1AO75920 110 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 REC8O95072 547 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 FERP16591 822 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 ATP5DP30049 168 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 MAT2AP31153 395 aaKnown RBP2.34□□□□□ -2.03
SMC4-227ENST00000497984 CTNNB1P35222 781 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 SAA4P35542 130 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 ACADSBP45954 432 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 OR1D4P47884 311 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 RPS4XP62701 263 aaKnown RBP2.34□□□□□ -2.03
SMC4-227ENST00000497984 HERV-K104P63124 156 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 SMC1AQ14683 1233 aaKnown RBP2.34□□□□□ -2.03
SMC4-227ENST00000497984 MORF4L2Q15014 288 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 IFI44LQ53G44 452 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 ZNF658Q5TYW1 1059 aaPredicted RBP2.34□□□□□ -2.03
SMC4-227ENST00000497984 NKAIN2Q5VXU1 208 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 HIST2H2AA3Q6FI13 130 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 COLGALT1Q8NBJ5 622 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 OR2L5Q8NG80 312 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 FNDC8Q8TC99 324 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 SETD7Q8WTS6 366 aaKnown RBP2.34□□□□□ -2.03
SMC4-227ENST00000497984 RNF138Q8WVD3 245 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 RAB3CQ96E17 227 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 JPH2Q9BR39 696 aaPredicted RBP2.34□□□□□ -2.03
SMC4-227ENST00000497984 OPN3Q9H1Y3 402 aaPredicted RBP2.34□□□□□ -2.03
SMC4-227ENST00000497984 TSPY26PQ9H489 355 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 ADGRL4Q9HBW9 690 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 NRN1Q9NPD7 142 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 ERVK-18Q9QC07 812 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 NARFQ9UHQ1 456 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 STX8Q9UNK0 236 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 CA5BQ9Y2D0 317 aa2.34□□□□□ -2.03
SMC4-227ENST00000497984 RPH3AQ9Y2J0 694 aaPredicted RBP2.34□□□□□ -2.03
SMC4-227ENST00000497984 KIF7Q2M1P5 1343 aa2.34□□□□□ -2.04
SMC4-227ENST00000497984 LRRD1A4D1F6 860 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 G3V3Y1 287 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 PDLIM1O00151 329 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 EEF2KO00418 725 aaKnown RBP2.33□□□□□ -2.04
SMC4-227ENST00000497984 EI24O14681 340 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 SLC2A10O95528 541 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 WNT2P09544 360 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 HOXB7P09629 217 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 ALOX5P09917 674 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 HIST1H2AGP0C0S8 130 aaPredicted RBP2.33□□□□□ -2.04
SMC4-227ENST00000497984 PTPN4P29074 926 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 ALDH3B2P48448 385 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 NT5C2P49902 561 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 METAP1P53582 386 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 STX17P56962 302 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 ZNF33BQ06732 778 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 TEFQ10587 303 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 SLMAPQ14BN4 828 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 ZIC1Q15915 447 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 PAGE2BQ5JRK9 111 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 CWC27Q6UX04 472 aaKnown RBP2.33□□□□□ -2.04
SMC4-227ENST00000497984 RANBP3LQ86VV4 465 aaPredicted RBP2.33□□□□□ -2.04
SMC4-227ENST00000497984 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.33□□□□□ -2.04
SMC4-227ENST00000497984 C14orf178Q8N769 122 aaPredicted RBP2.33□□□□□ -2.04
SMC4-227ENST00000497984 RELL2Q8NC24 303 aaPredicted RBP2.33□□□□□ -2.04
SMC4-227ENST00000497984 OR4A16Q8NH70 328 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 P3H4Q92791 437 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 HIST1H2ACQ93077 130 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 JAKMIP1Q96N16 626 aaKnown RBP2.33□□□□□ -2.04
SMC4-227ENST00000497984 FAM213AQ9BRX8 229 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 DPH7Q9BTV6 452 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 HCAR1Q9BXC0 346 aa2.33□□□□□ -2.04
SMC4-227ENST00000497984 OSBPL8Q9BZF1 889 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms