RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 ART3Q13508 389 aa11.2□□□□□ -0.62
HDLBP-246ENST00000496569 FNDC7Q5VTL7 733 aa11.2□□□□□ -0.62
HDLBP-246ENST00000496569 FAM71E1Q6IPT2 247 aa11.2□□□□□ -0.62
HDLBP-246ENST00000496569 ZNF585AQ6P3V2 769 aa11.2□□□□□ -0.62
HDLBP-246ENST00000496569 GALNT18Q6P9A2 607 aa11.2□□□□□ -0.62
HDLBP-246ENST00000496569 RPTNQ6XPR3 784 aa11.2□□□□□ -0.62
HDLBP-246ENST00000496569 BNC2Q6ZN30 1099 aaPredicted RBP11.2□□□□□ -0.62
HDLBP-246ENST00000496569 WDR53Q7Z5U6 358 aaPredicted RBP11.2□□□□□ -0.62
HDLBP-246ENST00000496569 CCDC71Q8IV32 467 aaPredicted RBP11.2□□□□□ -0.62
HDLBP-246ENST00000496569 C7orf57Q8NEG2 295 aa11.2□□□□□ -0.62
HDLBP-246ENST00000496569 OR7G2Q8NG99 324 aa11.2□□□□□ -0.62
HDLBP-246ENST00000496569 OR7G1Q8NGA0 311 aa11.2□□□□□ -0.62
HDLBP-246ENST00000496569 SPPL2AQ8TCT8 520 aa11.2□□□□□ -0.62
HDLBP-246ENST00000496569 TCP10LQ8TDR4 215 aa11.2□□□□□ -0.62
HDLBP-246ENST00000496569 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.2□□□□□ -0.626e-8■■■□□ 17.2
HDLBP-246ENST00000496569 MARVELD3Q96A59 401 aa11.2□□□□□ -0.62
HDLBP-246ENST00000496569 OMA1Q96E52 524 aa11.2□□□□□ -0.62
HDLBP-246ENST00000496569 ZNF597Q96LX8 424 aa11.2□□□□□ -0.62
HDLBP-246ENST00000496569 RILPQ96NA2 401 aa11.2□□□□□ -0.62
HDLBP-246ENST00000496569 VKORC1Q9BQB6 163 aa11.2□□□□□ -0.62
HDLBP-246ENST00000496569 IQCGQ9H095 443 aaKnown RBP11.2□□□□□ -0.62
HDLBP-246ENST00000496569 LDAHQ9H6V9 325 aa11.2□□□□□ -0.62
HDLBP-246ENST00000496569 EXO5Q9H790 373 aa11.2□□□□□ -0.62
HDLBP-246ENST00000496569 GALNT9Q9HCQ5 603 aa11.2□□□□□ -0.62
HDLBP-246ENST00000496569 ZFP64Q9NPA5 681 aa11.2□□□□□ -0.62
HDLBP-246ENST00000496569 SLC35C2Q9NQQ7 365 aa11.2□□□□□ -0.62
HDLBP-246ENST00000496569 MKS1Q9NXB0 559 aa11.2□□□□□ -0.62
HDLBP-246ENST00000496569 BOKQ9UMX3 212 aaPredicted RBP11.2□□□□□ -0.62
HDLBP-246ENST00000496569 MED12LQ86YW9 2145 aa11.2□□□□□ -0.62
HDLBP-246ENST00000496569 TRGV5A0A0B4J1U4 118 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 SERTM1A2A2V5 107 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 FAM90A27PA6NNH2 459 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 AZIN1O14977 448 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 TRIM13O60858 407 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 UGT2B11O75310 529 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 TRIM3O75382 744 aaPredicted RBP11.19□□□□□ -0.62
HDLBP-246ENST00000496569 PPM1BO75688 479 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 RSL1D1O76021 490 aaKnown RBP11.19□□□□□ -0.62
HDLBP-246ENST00000496569 LINC00032P0C843 101 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 UROSP10746 265 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 DRD2P14416 443 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 EFNA1P20827 205 aaPredicted RBP11.19□□□□□ -0.62
HDLBP-246ENST00000496569 PTGDSP41222 190 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 MC3RP41968 323 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 MAN2A2P49641 1150 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 SMSP52788 366 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 WNT3P56703 355 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 PLCXD2Q0VAA5 305 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 SLC10A1Q14973 349 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 GXYLT1Q4G148 440 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 ZNF385BQ569K4 471 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 CES4AQ5XG92 561 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 NOXRED1Q6NXP6 359 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 WDR93Q6P2C0 686 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 MTFR2Q6P444 385 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 EMBQ6PCB8 327 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 Q6ZSR9 355 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 TRIM46Q7Z4K8 759 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 RIBC1Q8N443 379 aaPredicted RBP11.19□□□□□ -0.62
HDLBP-246ENST00000496569 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.19□□□□□ -0.62
HDLBP-246ENST00000496569 ZNF675Q8TD23 568 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 HGDQ93099 445 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 CAVIN3Q969G5 261 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 TP53INP1Q96A56 240 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 LCORQ96JN0 433 aaPredicted RBP11.19□□□□□ -0.62
HDLBP-246ENST00000496569 PKNOX2Q96KN3 472 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 BBS4Q96RK4 519 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 PARD6BQ9BYG5 372 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 FOLH1BQ9HBA9 442 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 CNIH4Q9P003 139 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 PSME2Q9UL46 239 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 SLC6A5Q9Y345 797 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 FAM215AQ9Y5M1 114 aa11.19□□□□□ -0.62
HDLBP-246ENST00000496569 CCDC151A5D8V7 595 aa11.18□□□□□ -0.62
HDLBP-246ENST00000496569 NKX2-6A6NCS4 301 aa11.18□□□□□ -0.62
HDLBP-246ENST00000496569 TP53I11O14683 189 aa11.18□□□□□ -0.62
HDLBP-246ENST00000496569 AKAP10O43572 662 aa11.18□□□□□ -0.62
HDLBP-246ENST00000496569 SEC22BO75396 215 aa11.18□□□□□ -0.62
HDLBP-246ENST00000496569 CLDN14O95500 239 aa11.18□□□□□ -0.62
HDLBP-246ENST00000496569 ABCB1P08183 1280 aaPredicted RBP11.18□□□□□ -0.62
HDLBP-246ENST00000496569 SDC1P18827 310 aa11.18□□□□□ -0.62
HDLBP-246ENST00000496569 DDCP20711 480 aa11.18□□□□□ -0.62
HDLBP-246ENST00000496569 TCEA1P23193 301 aaKnown RBP11.18□□□□□ -0.62
HDLBP-246ENST00000496569 CASP3P42574 277 aa11.18□□□□□ -0.62
HDLBP-246ENST00000496569 KIR3DL1P43629 444 aa11.18□□□□□ -0.62
HDLBP-246ENST00000496569 MASP1P48740 699 aa11.18□□□□□ -0.62
HDLBP-246ENST00000496569 NCBP2P52298 156 aaKnown RBP eCLIP11.18□□□□□ -0.624e-8■■■■□ 22.1
HDLBP-246ENST00000496569 NRG3P56975 720 aa11.18□□□□□ -0.62
HDLBP-246ENST00000496569 RPL38P63173 70 aaKnown RBP11.18□□□□□ -0.62
HDLBP-246ENST00000496569 ZNF155Q12901 538 aaPredicted RBP11.18□□□□□ -0.62
HDLBP-246ENST00000496569 HEPACAMQ14CZ8 416 aa11.18□□□□□ -0.62
HDLBP-246ENST00000496569 KIAA0040Q15053 153 aa11.18□□□□□ -0.62
HDLBP-246ENST00000496569 ZNF630Q2M218 657 aaPredicted RBP11.18□□□□□ -0.62
HDLBP-246ENST00000496569 HYAL4Q2M3T9 481 aa11.18□□□□□ -0.62
HDLBP-246ENST00000496569 KRT71Q3SY84 523 aa11.18□□□□□ -0.62
HDLBP-246ENST00000496569 GALNTL6Q49A17 601 aa11.18□□□□□ -0.62
HDLBP-246ENST00000496569 EIPR1Q53HC9 387 aa11.18□□□□□ -0.62
HDLBP-246ENST00000496569 ARL13AQ5H913 290 aaPredicted RBP11.18□□□□□ -0.62
HDLBP-246ENST00000496569 KANK2Q63ZY3 851 aa11.18□□□□□ -0.62
HDLBP-246ENST00000496569 RTL6Q6ICC9 239 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms