RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 TEX12Q9BXU0 123 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 PPP4R1LQ9P1A2 415 aa8.06□□□□□ -1.12
U2AF1-212ENST00000496462 RP1L1Q8IWN7 2480 aaPredicted RBP8.06□□□□□ -1.12
U2AF1-212ENST00000496462 IGLV3-12A0A075B6K2 115 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 CLIC1O00299 241 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 ITGB2P05107 769 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 GABRA4P48169 554 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 MAP4K2Q12851 820 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 TLR1Q15399 786 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 SLC22A10Q63ZE4 541 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 NUP54Q7Z3B4 507 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 C6orf120Q7Z4R8 191 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 ZNF563Q8TA94 476 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 TP53INP1Q96A56 240 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 PPWD1Q96BP3 646 aaKnown RBP8.05□□□□□ -1.12
U2AF1-212ENST00000496462 C8orf44Q96CB5 159 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 ZNF700Q9H0M5 742 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 MMP25Q9NPA2 562 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 DKKL1Q9UK85 242 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 IFT52Q9Y366 437 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 FASNP49327 2511 aaKnown RBP8.05□□□□□ -1.12
U2AF1-212ENST00000496462 GABRR3A8MPY1 467 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 STX11O75558 287 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 LAMP1P11279 417 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 EIF2S3P41091 472 aaKnown RBP8.05□□□□□ -1.12
U2AF1-212ENST00000496462 RPS18P62269 152 aaKnown RBP8.05□□□□□ -1.12
U2AF1-212ENST00000496462 BTG2P78543 158 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 MYBPC3Q14896 1274 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 TGIF1Q15583 401 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 PMM1Q92871 262 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 CXorf21Q9HAI6 301 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 TPT1P8Q9HAU6 139 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 ASCL3Q9NQ33 180 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 WDR45Q9Y484 360 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 PCDH15Q96QU1 1955 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 TCRBV16S1A1N1A0A5B0 115 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 AP3D1O14617 1153 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 JRKO75564 520 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 SLC25A12O75746 678 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 B3GALT4O96024 378 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 MC3RP41968 323 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 PPICP45877 212 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 LACTB2Q53H82 288 aaPredicted RBP8.05□□□□□ -1.12
U2AF1-212ENST00000496462 CDK20Q8IZL9 346 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 OR11G2Q8NGC1 345 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 BBS10Q8TAM1 723 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 C19orf53Q9UNZ5 99 aaPredicted RBP8.05□□□□□ -1.12
U2AF1-212ENST00000496462 PTGDR2Q9Y5Y4 395 aa8.05□□□□□ -1.12
U2AF1-212ENST00000496462 VSTM2BA6NLU5 285 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 CCT8L1PA6NM43 557 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 ONECUT2O95948 504 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 ATP1B1P05026 303 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 GSNP06396 782 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 IL7RP16871 459 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 ZNF41P51814 821 aaPredicted RBP8.04□□□□□ -1.12
U2AF1-212ENST00000496462 SMIM11AP58511 58 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 CLN3Q13286 438 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 MRPL14Q6P1L8 145 aaKnown RBP8.04□□□□□ -1.12
U2AF1-212ENST00000496462 ZNF793Q6ZN11 406 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 ZNF551Q7Z340 670 aaPredicted RBP8.04□□□□□ -1.12
U2AF1-212ENST00000496462 MCEMP1Q8IX19 187 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 NUBPLQ8TB37 319 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 RMND5BQ96G75 393 aaPredicted RBP8.04□□□□□ -1.12
U2AF1-212ENST00000496462 EBF4Q9BQW3 602 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 BTBD2Q9BX70 525 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 MUC13Q9H3R2 512 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 CLMPQ9H6B4 373 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 TMEM27Q9HBJ8 222 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 ZBTB20Q9HC78 741 aaPredicted RBP8.04□□□□□ -1.12
U2AF1-212ENST00000496462 SPAG4Q9NPE6 437 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 POLE3Q9NRF9 147 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 CNIH4Q9P003 139 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 SEC14L3Q9UDX4 400 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 GIMAP2Q9UG22 337 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 CHD6Q8TD26 2715 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 PGRMC2O15173 223 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 PLOD3O60568 738 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 IFI6P09912 130 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 GPR143P51810 404 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 BNIP2Q12982 314 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 SPRED3Q2MJR0 410 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 SPATS1Q496A3 300 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 ANKRD26P1Q6NSI1 321 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 TNFAIP8L2Q6P589 184 aaPredicted RBP8.04□□□□□ -1.12
U2AF1-212ENST00000496462 POGLUT1Q8NBL1 392 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 FBXO30Q8TB52 745 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 AMDHD1Q96NU7 426 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 DOHHQ9BU89 302 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 PRRG4Q9BZD6 226 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 CBLCQ9ULV8 474 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 DSPP15924 2871 aaKnown RBP8.04□□□□□ -1.12
U2AF1-212ENST00000496462 TMEM131Q92545 1883 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 WWP2O00308 870 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 NKX2-8O15522 239 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 TIAF1O95411 115 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 DGKQP52824 942 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 MLC1Q15049 377 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 UGT3A2Q3SY77 523 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 FLYWCH1Q4VC44 716 aa8.04□□□□□ -1.12
U2AF1-212ENST00000496462 BLOC1S3Q6QNY0 202 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms