RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 COQ8AQ8NI60 647 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 SPPL2AQ8TCT8 520 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 GLYATL2Q8WU03 294 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 ORAI1Q96D31 301 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 MRPL48Q96GC5 212 aaKnown RBP8.59□□□□□ -1.03
HPS4-217ENST00000496385 GPR21Q99679 349 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 NTMT1Q9BV86 223 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 CACNG6Q9BXT2 260 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 PBX4Q9BYU1 374 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 FAM117AQ9C073 453 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 SEMA4CQ9C0C4 833 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 C11orf16Q9NQ32 467 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 PRDM9Q9NQV7 894 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 MYEF2Q9P2K5 600 aaKnown RBP8.59□□□□□ -1.03
HPS4-217ENST00000496385 GPR160Q9UJ42 338 aa8.59□□□□□ -1.03
HPS4-217ENST00000496385 UBQLN1Q9UMX0 589 aaKnown RBP8.59□□□□□ -1.03
HPS4-217ENST00000496385 SCN1AP35498 2009 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 LOC105369274A0A096LPK9 316 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 PMS2P1A4D2B8 440 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 MAGEB17A8MXT2 336 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 TEX46H3BTG2 121 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 NDUFS3O75489 264 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 GJB5O95377 273 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 RLN2P04090 185 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 FGF1P05230 155 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 GLAP06280 429 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 KIR3DL1P43629 444 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 CDH12P55289 794 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 SLC14A1Q13336 389 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 GK2Q14410 553 aaPredicted RBP8.58□□□□□ -1.04
HPS4-217ENST00000496385 HLXQ14774 488 aaPredicted RBP8.58□□□□□ -1.04
HPS4-217ENST00000496385 CHRNA6Q15825 494 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 FAM76BQ5HYJ3 339 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 SIRPB2Q5JXA9 342 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 BEND4Q6ZU67 534 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 HFE2Q6ZVN8 426 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 SKA3Q8IX90 412 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 RGL4Q8IZJ4 473 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 RNF113BQ8IZP6 322 aaKnown RBP8.58□□□□□ -1.04
HPS4-217ENST00000496385 OR4N4Q8N0Y3 316 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 FAM26EQ8N5C1 309 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 GPR26Q8NDV2 337 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 POF1BQ8WVV4 589 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 ELMOD3Q96FG2 381 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 SENP5Q96HI0 755 aaPredicted RBP8.58□□□□□ -1.04
HPS4-217ENST00000496385 NARS2Q96I59 477 aaKnown RBP8.58□□□□□ -1.04
HPS4-217ENST00000496385 RBM14Q96PK6 669 aaKnown RBP8.58□□□□□ -1.04
HPS4-217ENST00000496385 TSSK6Q9BXA6 273 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 SPRTNQ9H040 489 aaPredicted RBP8.58□□□□□ -1.04
HPS4-217ENST00000496385 SAP130Q9H0E3 1048 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 MTIF3Q9H2K0 278 aaKnown RBP8.58□□□□□ -1.04
HPS4-217ENST00000496385 METTL17Q9H7H0 456 aaPredicted RBP8.58□□□□□ -1.04
HPS4-217ENST00000496385 POLE3Q9NRF9 147 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 FAM120CQ9NX05 1096 aaKnown RBP8.58□□□□□ -1.04
HPS4-217ENST00000496385 ZNF624Q9P2J8 865 aaPredicted RBP8.58□□□□□ -1.04
HPS4-217ENST00000496385 FAM50BQ9Y247 325 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 PDCD11Q14690 1871 aaKnown RBP8.58□□□□□ -1.04
HPS4-217ENST00000496385 ANXA2P2A6NMY6 339 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 FPGTO14772 594 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 RECQL4O94761 1208 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 ACAA1P09110 424 aaPredicted RBP8.58□□□□□ -1.04
HPS4-217ENST00000496385 OSMP13725 252 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 PKMP14618 531 aaKnown RBP8.58□□□□□ -1.04
HPS4-217ENST00000496385 CXCL2P19875 107 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 PVALBP20472 110 aaPredicted RBP8.58□□□□□ -1.04
HPS4-217ENST00000496385 PSMA3P25788 255 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 PNPLA4P41247 253 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 KIAA1024LP59773 190 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 RPS25P62851 125 aaKnown RBP8.58□□□□□ -1.04
HPS4-217ENST00000496385 DEFA5Q01523 94 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 DYRK1AQ13627 763 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 ZBTB6Q15916 424 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 HECTD3Q5T447 861 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 CASP12Q6UXS9 341 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 ASB18Q6ZVZ8 466 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 DNAJB7Q7Z6W7 309 aaPredicted RBP8.58□□□□□ -1.04
HPS4-217ENST00000496385 OAFQ86UD1 273 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 NANPQ8TBE9 248 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 WDR20Q8TBZ3 569 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 TCEAL4Q96EI5 215 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 PANX1Q96RD7 426 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 TRIM62Q9BVG3 475 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 NKX2-4Q9H2Z4 354 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 OSGEPL1Q9H4B0 414 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 FGF20Q9NP95 211 aaPredicted RBP8.58□□□□□ -1.04
HPS4-217ENST00000496385 NPDC1Q9NQX5 325 aaPredicted RBP8.58□□□□□ -1.04
HPS4-217ENST00000496385 ASB6Q9NWX5 421 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 TESQ9UGI8 421 aaKnown RBP8.58□□□□□ -1.04
HPS4-217ENST00000496385 BTNL2Q9UIR0 455 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 ACAD8Q9UKU7 415 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 PCDHB11Q9Y5F2 797 aa8.58□□□□□ -1.04
HPS4-217ENST00000496385 DNMT3AQ9Y6K1 912 aaPredicted RBP8.58□□□□□ -1.04
HPS4-217ENST00000496385 TCRBV16S1A1N1A0A5B0 115 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 TMEM229AB2RXF0 380 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 MANBAO00462 879 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 B4GALT3O60512 393 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 EIF3GO75821 320 aaKnown RBP eCLIP8.57□□□□□ -1.04
HPS4-217ENST00000496385 NFATC1O95644 943 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 ATXN1LP0C7T5 689 aaKnown RBP8.57□□□□□ -1.04
HPS4-217ENST00000496385 ELK1P19419 428 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms