RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 S100A5P33763 92 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 SOX6P35712 828 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 IFNGR2P38484 337 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 MC3RP41968 323 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 PPP5CP53041 499 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 CLDN2P57739 230 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 RHAGQ02094 409 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 DUSP2Q05923 314 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 KIR2DS3Q14952 304 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 SUZ12Q15022 739 aaKnown RBP10.42□□□□□ -0.74
CMSS1-208ENST00000496116 OXA1LQ15070 435 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 NCF4Q15080 339 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 MFSD4BQ5TF39 518 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 C1orf94Q6P1W5 598 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 TUBA3EQ6PEY2 450 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 IQCHQ86VS3 1027 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 TCEANCQ8N8B7 351 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 OR9A2Q8NGT5 310 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 NT5CQ8TCD5 201 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 OR1E3Q8WZA6 343 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 C16orf58Q96GQ5 468 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 TRNT1Q96Q11 434 aaKnown RBP10.42□□□□□ -0.74
CMSS1-208ENST00000496116 CHCHD6Q9BRQ6 235 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 C6orf62Q9GZU0 229 aaPredicted RBP10.42□□□□□ -0.74
CMSS1-208ENST00000496116 OR51E2Q9H255 320 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 ARMC7Q9H6L4 198 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 PCOLCE2Q9UKZ9 415 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 PCDHGA3Q9Y5H0 932 aa10.42□□□□□ -0.74
CMSS1-208ENST00000496116 GSAPA4D1B5 854 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 APBB3O95704 486 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 EGFP01133 1207 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 IGFBP1P08833 259 aaPredicted RBP10.41□□□□□ -0.74
CMSS1-208ENST00000496116 ALOX5P09917 674 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 ZNF888P0CJ79 500 aaPredicted RBP10.41□□□□□ -0.74
CMSS1-208ENST00000496116 DBTP11182 482 aaKnown RBP10.41□□□□□ -0.74
CMSS1-208ENST00000496116 MMP11P24347 488 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 CTHP32929 405 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 PTGER1P34995 402 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 ACTR1BP42025 376 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 BCAP31P51572 246 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 TAS2R41P59536 307 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 ACTR1AP61163 376 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 OCLNQ16625 522 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 PERM1Q5SV97 790 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 C16orf62Q7Z3J2 963 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 ZER1Q7Z7L7 766 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 COMTD1Q86VU5 262 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 TRIM69Q86WT6 500 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 KCT2Q8NC54 265 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 ZNF681Q96N22 645 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 OR5M11Q96RB7 305 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 MND1Q9BWT6 205 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 POLDIP3Q9BY77 421 aaKnown RBP10.41□□□□□ -0.74
CMSS1-208ENST00000496116 ACTRT3Q9BYD9 372 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 EQTNQ9NQ60 294 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 MAN2C1Q9NTJ4 1040 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 KLHL28Q9NXS3 571 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 TAS2R16Q9NYV7 291 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 TVP23BQ9NYZ1 205 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 DNAJC27Q9NZQ0 273 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 PHF11Q9UIL8 331 aa10.41□□□□□ -0.74
CMSS1-208ENST00000496116 SAGE2PA6NJ88 616 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 TAF4O00268 1085 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 RFXAPO00287 272 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 EML2O95834 649 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 EPPINO95925 133 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 AGR2O95994 175 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 ZNF10P21506 573 aaPredicted RBP10.4□□□□□ -0.74
CMSS1-208ENST00000496116 CDH3P22223 829 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 HNRNPA2B1P22626 353 aaKnown RBP10.4□□□□□ -0.74
CMSS1-208ENST00000496116 CPN2P22792 545 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 GRK5P34947 590 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 PCYT1AP49585 367 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 SMSP52788 366 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 C1DQ13901 141 aaKnown RBP10.4□□□□□ -0.74
CMSS1-208ENST00000496116 RAB30Q15771 203 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 TSTQ16762 297 aaKnown RBP10.4□□□□□ -0.74
CMSS1-208ENST00000496116 INAVAQ3KP66 663 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 C19orf48Q6RUI8 117 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 OLIG3Q7RTU3 272 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 VN1R4Q7Z5H5 301 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 LRRC25Q8N386 305 aaPredicted RBP10.4□□□□□ -0.74
CMSS1-208ENST00000496116 MORN4Q8NDC4 146 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 ADAMTS15Q8TE58 950 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 CENPOQ9BU64 300 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 TSSK6Q9BXA6 273 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 NXF2Q9GZY0 626 aaKnown RBP10.4□□□□□ -0.74
CMSS1-208ENST00000496116 CACYBPQ9HB71 228 aaKnown RBP10.4□□□□□ -0.74
CMSS1-208ENST00000496116 GIN1Q9NXP7 522 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 ZNF624Q9P2J8 865 aaPredicted RBP10.4□□□□□ -0.74
CMSS1-208ENST00000496116 MKLN1Q9UL63 735 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 CFL2Q9Y281 166 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.4□□□□□ -0.74
CMSS1-208ENST00000496116 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.4□□□□□ -0.74
CMSS1-208ENST00000496116 SNTNA6NMZ2 147 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 H0Y8X5 98 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 TNFRSF10CO14798 259 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 TLX2O43763 284 aaPredicted RBP10.4□□□□□ -0.74
CMSS1-208ENST00000496116 RASGRP1O95267 797 aa10.4□□□□□ -0.74
CMSS1-208ENST00000496116 TP53P04637 393 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms