RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 Q6ZS52 159 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 CEP68Q76N32 757 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 VN1R4Q7Z5H5 301 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 TMEM179BQ7Z7N9 219 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 ZNF605Q86T29 641 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 TRIM73Q86UV7 250 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 ERI1Q8IV48 349 aaKnown RBP6.51□□□□□ -1.37
USP39-219ENST00000496047 PEX5LQ8IYB4 626 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 ZNF295-AS1Q8N0V1 137 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 MMP21Q8N119 569 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 SLC22A18ASQ8N1D0 253 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 PARP8Q8N3A8 854 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 SMYD1Q8NB12 490 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 ZNF540Q8NDQ6 660 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 CHDHQ8NE62 594 aaPredicted RBP6.51□□□□□ -1.37
USP39-219ENST00000496047 BPIFB6Q8NFQ5 453 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 VANGL1Q8TAA9 524 aaPredicted RBP6.51□□□□□ -1.37
USP39-219ENST00000496047 FAM81AQ8TBF8 368 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 LMX1AQ8TE12 382 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 RAB2BQ8WUD1 216 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 RORBQ92753 470 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 RAB8BQ92930 207 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 MYDGFQ969H8 173 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 TM4SF19Q96DZ7 209 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 AHCYL2Q96HN2 611 aaKnown RBP6.51□□□□□ -1.37
USP39-219ENST00000496047 HRASLS5Q96KN8 279 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 PRRC1Q96M27 445 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 Q96MT0 163 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 SLC6A18Q96N87 628 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 TRNT1Q96Q11 434 aaKnown RBP6.51□□□□□ -1.37
USP39-219ENST00000496047 ALPK1Q96QP1 1244 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 OR7D2Q96RA2 312 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 CD180Q99467 661 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 PELOQ9BRX2 385 aaKnown RBP6.51□□□□□ -1.37
USP39-219ENST00000496047 FNDC11Q9BVV2 318 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 AMBRA1Q9C0C7 1298 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 POLR2J2Q9GZM3 115 aaKnown RBP6.51□□□□□ -1.37
USP39-219ENST00000496047 POLR2J3Q9H1A7 115 aaKnown RBP6.51□□□□□ -1.37
USP39-219ENST00000496047 SOX17Q9H6I2 414 aaPredicted RBP6.51□□□□□ -1.37
USP39-219ENST00000496047 SLAMF7Q9NQ25 335 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 GPATCH2Q9NW75 528 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 SOHLH2Q9NX45 425 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 VNN3Q9NY84 501 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 WARS2Q9UGM6 360 aaKnown RBP6.51□□□□□ -1.37
USP39-219ENST00000496047 EBF1Q9UH73 591 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 TMEFF2Q9UIK5 374 aaPredicted RBP6.51□□□□□ -1.37
USP39-219ENST00000496047 POMT2Q9UKY4 750 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 DAPP1Q9UN19 280 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 ATG4BQ9Y4P1 393 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 PCDHGB5Q9Y5G0 923 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 PCDHGA8Q9Y5G5 932 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 MAGED1Q9Y5V3 778 aaPredicted RBP6.51□□□□□ -1.37
USP39-219ENST00000496047 SLC22A7Q9Y694 548 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 TRANK1O15050 2925 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 MPDZO75970 2070 aa6.51□□□□□ -1.37
USP39-219ENST00000496047 A0A087WV62 115 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 PRAMEF33A0A0G2JMD5 474 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 IRGMA1A4Y4 181 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 HYKKA2RU49 373 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 SH3D21A4FU49 640 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 SYNDIG1LA6NDD5 238 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 GLOD5A6NK44 160 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 TTC36A6NLP5 189 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 FAM170BA6NMN3 283 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 SNTNA6NMZ2 147 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 ENO4A6NNW6 628 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 RHPN2P1A8MT19 583 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 H0YGG7 62 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 TGFBR3LH3BV60 316 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 CLDN4O14493 209 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 DYRK3O43781 588 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 OR10H2O60403 315 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 OR10H3O60404 316 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 SRPX2O60687 465 aaPredicted RBP6.5□□□□□ -1.37
USP39-219ENST00000496047 PRAMEF10O60809 474 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 NME6O75414 186 aaPredicted RBP6.5□□□□□ -1.37
USP39-219ENST00000496047 TRMUO75648 421 aaKnown RBP6.5□□□□□ -1.37
USP39-219ENST00000496047 UBXN7O94888 489 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 OR6B1O95007 311 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 EML2O95834 649 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 PROS1P07225 676 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 C8orf89P0DMQ9 161 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 RNH1P13489 461 aaKnown RBP6.5□□□□□ -1.37
USP39-219ENST00000496047 CPMP14384 443 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 NME1P15531 152 aaKnown RBP6.5□□□□□ -1.37
USP39-219ENST00000496047 ITIH1P19827 911 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 NT5EP21589 574 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 ALDH4A1P30038 563 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 PIGAP37287 484 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 MC3RP41968 323 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 CTSKP43235 329 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 OR1E2P47887 323 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 AVPR1BP47901 424 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 FASLGP48023 281 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 SERPINB10P48595 397 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 ARL4DP49703 201 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 XKP51811 444 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 TMBIM6P55061 237 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 LIM2P55344 173 aa6.5□□□□□ -1.37
USP39-219ENST00000496047 VSX2P58304 361 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms