RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 PGM3O95394 542 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 C9P02748 559 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 MT-ND1P03886 318 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 SEMG1P04279 462 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 ATP1B1P05026 303 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 HMGN2P05204 90 aaKnown RBP9.62□□□□□ -0.87
HDAC3-214ENST00000495485 RPLP0P05388 317 aaKnown RBP9.62□□□□□ -0.87
HDAC3-214ENST00000495485 LYNP07948 512 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 TFPTP0C1Z6 253 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 MSL3P1P0C860 447 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 SLC35E2P0CK97 266 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 C8orf89P0DMQ9 161 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 OR12D1P0DN82 309 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 ANXA8P13928 327 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 RHCEP18577 417 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 AQP1P29972 269 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 PCBP3P57721 371 aaKnown RBP9.62□□□□□ -0.87
HDAC3-214ENST00000495485 KCNJ10P78508 379 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 EEF1A2Q05639 463 aaKnown RBP9.62□□□□□ -0.87
HDAC3-214ENST00000495485 STX4Q12846 297 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 SERTAD2Q14140 314 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 ISXQ2M1V0 245 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 GPAT3Q53EU6 434 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 PERM1Q5SV97 790 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 C6orf52Q5T4I8 152 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 HES3Q5TGS1 186 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 DHRS13Q6UX07 377 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 TMEM107Q6UX40 140 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 C16orf62Q7Z3J2 963 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 PRSS42Q7Z5A4 293 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 BPHLQ86WA6 291 aaPredicted RBP9.62□□□□□ -0.87
HDAC3-214ENST00000495485 LINC00471Q8N535 108 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 FAM86B1Q8N7N1 296 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 SUN3Q8TAQ9 357 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 SLC38A5Q8WUX1 472 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 CYGBQ8WWM9 190 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 TFAP2CQ92754 450 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 RBM18Q96H35 190 aaKnown RBP9.62□□□□□ -0.87
HDAC3-214ENST00000495485 TMEM19Q96HH6 336 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 MAGED4Q96JG8 741 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 C10orf90Q96M02 699 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 ZNF285Q96NJ3 590 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 TRNT1Q96Q11 434 aaKnown RBP9.62□□□□□ -0.87
HDAC3-214ENST00000495485 ADI1Q9BV57 179 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 TRIM4Q9C037 500 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 ARMC7Q9H6L4 198 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 BCL2L10Q9HD36 194 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 KLHL28Q9NXS3 571 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 ZNF232Q9UNY5 417 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 SLC9A8Q9Y2E8 581 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 IFT52Q9Y366 437 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 SAMHD1Q9Y3Z3 626 aaKnown RBP9.62□□□□□ -0.87
HDAC3-214ENST00000495485 DMXL2Q8TDJ6 3036 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 EPG5Q9HCE0 2579 aa9.62□□□□□ -0.87
HDAC3-214ENST00000495485 COL27A1Q8IZC6 1860 aaPredicted RBP9.62□□□□□ -0.87
HDAC3-214ENST00000495485 CCDC187A0A096LP49 1063 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 A0A1W2PQM1 296 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 C7orf72A4D263 438 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 FITM1A5D6W6 292 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 A8MVJ9 347 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 hCG_2039718K7EN88 272 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 CYR61O00622 381 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 B4GAT1O43505 415 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 CHST10O43529 356 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 HS6ST1O60243 411 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 OR10H2O60403 315 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 PLOD3O60568 738 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 CTNSO60931 367 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 DNAJB5O75953 348 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 NT5EP21589 574 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 MYF6P23409 242 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 CD1CP29017 333 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 RRM2P31350 389 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 DCTP40126 519 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 MC3RP41968 323 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 CASP9P55211 416 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 HSD17B7P56937 341 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 OR1D5P58170 312 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 CCL7P80098 99 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 ZFP36L1Q07352 338 aaKnown RBP9.61□□□□□ -0.87
HDAC3-214ENST00000495485 IL18R1Q13478 541 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 LASP1Q14847 261 aaKnown RBP9.61□□□□□ -0.87
HDAC3-214ENST00000495485 ZNHIT3Q15649 155 aaPredicted RBP9.61□□□□□ -0.87
HDAC3-214ENST00000495485 SLC36A3Q495N2 470 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 NHSL2Q5HYW2 709 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 FAM180BQ6P0A1 224 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 CDC73Q6P1J9 531 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 TTC33Q6PID6 262 aaPredicted RBP9.61□□□□□ -0.87
HDAC3-214ENST00000495485 EPHX4Q8IUS5 362 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 SLITRK4Q8IW52 837 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 SLC44A2Q8IWA5 706 aaPredicted RBP9.61□□□□□ -0.87
HDAC3-214ENST00000495485 SFTPA2Q8IWL1 248 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 OR2L13Q8N349 312 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 CDRT4Q8N9R6 151 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 SETD9Q8NE22 299 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 PIK3C3Q8NEB9 887 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 WDR36Q8NI36 951 aaKnown RBP9.61□□□□□ -0.87
HDAC3-214ENST00000495485 ZNF675Q8TD23 568 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 NXPE2Q96DL1 559 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 MMABQ96EY8 250 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms