RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 RBP1P09455 135 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 GAAP10253 952 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 HIST1H1TP22492 207 aaPredicted RBP7.5□□□□□ -1.21
RIF1-211ENST00000494333 CPN2P22792 545 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 SERPINB1P30740 379 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 SSR2P43308 183 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 SERPINB8P50452 374 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 HLCSP50747 726 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 NEK2P51955 445 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 RAP1GDS1P52306 607 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 NRG3P56975 720 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 SRSF2Q01130 221 aaKnown RBP7.5□□□□□ -1.21
RIF1-211ENST00000494333 RBPJQ06330 500 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 SLAMF1Q13291 335 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 GTF2H2Q13888 395 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 PCBP2Q15366 365 aaKnown RBP eCLIP7.5□□□□□ -1.21
RIF1-211ENST00000494333 ZRSR2Q15696 482 aaKnown RBP7.5□□□□□ -1.21
RIF1-211ENST00000494333 KHDRBS2Q5VWX1 349 aaKnown RBP7.5□□□□□ -1.21
RIF1-211ENST00000494333 LIPJQ5W064 366 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 OR4C11Q6IEV9 310 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 GRHL2Q6ISB3 625 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 GTF2H2CQ6P1K8 395 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 TMEM132CQ8N3T6 1108 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 TMEM156Q8N614 296 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 FAM98AQ8NCA5 519 aaKnown RBP7.5□□□□□ -1.21
RIF1-211ENST00000494333 PIK3C3Q8NEB9 887 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 SLC44A1Q8WWI5 657 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 RELTQ969Z4 430 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 ATP6V1E2Q96A05 226 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 RGMAQ96B86 450 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 VMP1Q96GC9 406 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 PAFAH2Q99487 392 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 CCDC77Q9BR77 488 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 SORBS1Q9BX66 1292 aaKnown RBP7.5□□□□□ -1.21
RIF1-211ENST00000494333 FUT8Q9BYC5 575 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 SLC6A15Q9H2J7 730 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 TRIM45Q9H8W5 580 aaPredicted RBP7.5□□□□□ -1.21
RIF1-211ENST00000494333 LIN28AQ9H9Z2 209 aaKnown RBP7.5□□□□□ -1.21
RIF1-211ENST00000494333 LYRM4Q9HD34 91 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 ADAP2Q9NPF8 381 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 SH3BGRL2Q9UJC5 107 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 ZNF223Q9UK11 482 aaPredicted RBP7.5□□□□□ -1.21
RIF1-211ENST00000494333 PPIEQ9UNP9 301 aaKnown RBP7.5□□□□□ -1.21
RIF1-211ENST00000494333 SPACA6W5XKT8 324 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 FLNCQ14315 2725 aa7.5□□□□□ -1.21
RIF1-211ENST00000494333 SYNDIG1LA6NDD5 238 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 NPIPA5E9PKD4 350 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 H0YIV9 168 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 KLRC4-KLRK1H3BQV0 150 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 KIF2AO00139 706 aaPredicted RBP7.49□□□□□ -1.21
RIF1-211ENST00000494333 CCL21O00585 134 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 PLPP1O14494 284 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 ASNA1O43681 348 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 PRKNO60260 465 aaPredicted RBP7.49□□□□□ -1.21
RIF1-211ENST00000494333 NME2P1O60361 137 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 CDC14BO60729 498 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 SLC19A2O60779 497 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 KRT38O76015 456 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 MLYCDO95822 493 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 ECHS1P30084 290 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 ARL1P40616 181 aaPredicted RBP7.49□□□□□ -1.21
RIF1-211ENST00000494333 PIK3CBP42338 1070 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 PIK3CGP48736 1102 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 SERPINB9P50453 376 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 RPS13P62277 151 aaKnown RBP7.49□□□□□ -1.21
RIF1-211ENST00000494333 ID2Q02363 134 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 SERTAD2Q14140 314 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 ELAVL1Q15717 326 aaKnown RBP7.49□□□□□ -1.21
RIF1-211ENST00000494333 KRTCAP3Q53RY4 240 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 TECRLQ5HYJ1 363 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 C16orf47Q6ZP98 133 aaPredicted RBP7.49□□□□□ -1.21
RIF1-211ENST00000494333 TAOK1Q7L7X3 1001 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 GOLGA7Q7Z5G4 137 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 GPR180Q86V85 440 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 OR4N5Q8IXE1 308 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 CPSF7Q8N684 471 aaKnown RBP7.49□□□□□ -1.21
RIF1-211ENST00000494333 KIF18AQ8NI77 898 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 PTPMT1Q8WUK0 201 aaPredicted RBP7.49□□□□□ -1.21
RIF1-211ENST00000494333 DAZLQ92904 295 aaKnown RBP7.49□□□□□ -1.21
RIF1-211ENST00000494333 ANKRD9Q96BM1 317 aaPredicted RBP7.49□□□□□ -1.21
RIF1-211ENST00000494333 MTFMTQ96DP5 389 aaKnown RBP7.49□□□□□ -1.21
RIF1-211ENST00000494333 PHF21BQ96EK2 531 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 RBM18Q96H35 190 aaKnown RBP7.49□□□□□ -1.21
RIF1-211ENST00000494333 GPR137Q96N19 417 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 CENPKQ9BS16 269 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 KRTAP9-9Q9BYP9 154 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 KRTAP9-4Q9BYQ2 154 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 OR8D2Q9GZM6 311 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 NOL11Q9H8H0 719 aaKnown RBP7.49□□□□□ -1.21
RIF1-211ENST00000494333 DMRT3Q9NQL9 472 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 MS4A12Q9NXJ0 267 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 NFU1Q9UMS0 254 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 NPIPA1Q9UND3 350 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 YARS2Q9Y2Z4 477 aaKnown RBP7.49□□□□□ -1.21
RIF1-211ENST00000494333 RNF11Q9Y3C5 154 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 TSC22D4Q9Y3Q8 395 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 LRRK2Q5S007 2527 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 POLEQ07864 2286 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 PTPN13Q12923 2485 aa7.49□□□□□ -1.21
RIF1-211ENST00000494333 ICE1Q9Y2F5 2266 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms