RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 PRKCAP17252 672 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 NUDT1P36639 197 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 C1orf61Q13536 156 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 FAM76BQ5HYJ3 339 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 CCBE1Q6UXH8 406 aaPredicted RBP18.22■□□□□ 0.51
COL27A1-207ENST00000494090 SLC5A8Q8N695 610 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 ECHDC3Q96DC8 303 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 TMEM19Q96HH6 336 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 NECAB3Q96P71 396 aaPredicted RBP18.22■□□□□ 0.51
COL27A1-207ENST00000494090 VNN3Q9NY84 501 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 A0A0G2JPF8 293 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 FEZF1A0PJY2 475 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 HNRNPCL3B7ZW38 293 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 M0R233 179 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 ACOT7O00154 380 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 CDC123O75794 336 aaPredicted RBP18.22■□□□□ 0.51
COL27A1-207ENST00000494090 HNRNPCL4P0DMR1 293 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 MFSD13AQ14CX5 517 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 RGNQ15493 299 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 TCEAL8Q8IYN2 117 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 PIAS4Q8N2W9 510 aaPredicted RBP18.22■□□□□ 0.51
COL27A1-207ENST00000494090 PROKR1Q8TCW9 393 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 GATA6Q92908 595 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 PGAM5Q96HS1 289 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 RANBP3Q9H6Z4 567 aaPredicted RBP18.22■□□□□ 0.51
COL27A1-207ENST00000494090 IL17CQ9P0M4 197 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 ENTPD2Q9Y5L3 495 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 RBBP9O75884 186 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 ADRB3P13945 408 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 ZNF16P17020 682 aaPredicted RBP18.22■□□□□ 0.51
COL27A1-207ENST00000494090 ZNF584Q8IVC4 421 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 GATSQ8NAP1 163 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 FRS2Q8WU20 508 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 LPAR4Q99677 370 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 TREX1Q9NSU2 369 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 NUP50Q9UKX7 468 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 C5P01031 1676 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 GJE1A6NN92 205 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 H3BSH0 61 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 ZNF701M0R085 212 aaPredicted RBP18.22■□□□□ 0.51
COL27A1-207ENST00000494090 TGM5O43548 720 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 SCGB2A1O75556 95 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 P04436 131 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 CBLP22681 906 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 CD70P32970 193 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 SOX2P48431 317 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 FIGLAQ6QHK4 219 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 C3P1Q6ZMU1 363 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 NCCRP1Q6ZVX7 275 aaPredicted RBP18.22■□□□□ 0.51
COL27A1-207ENST00000494090 COMMD6Q7Z4G1 85 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 FOXRED2Q8IWF2 684 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 ACBD7Q8N6N7 88 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 BEX2Q9BXY8 128 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 ACTR6Q9GZN1 396 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 BEX1Q9HBH7 125 aa18.22■□□□□ 0.51
COL27A1-207ENST00000494090 MYADML2A6NDP7 307 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 DCTP40126 519 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 DLX2Q07687 328 aaPredicted RBP18.21■□□□□ 0.51
COL27A1-207ENST00000494090 RTL10Q7L3V2 364 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 CLEC4EQ9ULY5 219 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 MYH13Q9UKX3 1938 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 PLD2O14939 933 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 FOXA1P55317 472 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 TMPRSS9Q7Z410 1059 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 RPLP0P6Q8NHW5 317 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 ZC3H10Q96K80 434 aaKnown RBP18.21■□□□□ 0.51
COL27A1-207ENST00000494090 SLC29A1Q99808 456 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 POTEKPQ9BYX7 375 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 TREM1Q9NP99 234 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 AXIN1O15169 862 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 CYBAP13498 195 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 RIDAP52758 137 aaKnown RBP18.21■□□□□ 0.51
COL27A1-207ENST00000494090 PROX2Q3B8N5 592 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 RAET1LQ5VY80 246 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 PNCKQ6P2M8 343 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 RBM12BQ8IXT5 1001 aaKnown RBP18.21■□□□□ 0.51
COL27A1-207ENST00000494090 INPP5KQ9BT40 448 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 OR2B2Q9GZK3 357 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 RXFP3Q9NSD7 469 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 RTCAO00442 366 aaKnown RBP18.21■□□□□ 0.51
COL27A1-207ENST00000494090 PCDH17O14917 1159 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 ACY1Q03154 408 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 SERTAD2Q14140 314 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 KEAP1Q14145 624 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 LRIT3Q3SXY7 679 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 MAMDC2Q7Z304 686 aaPredicted RBP18.21■□□□□ 0.51
COL27A1-207ENST00000494090 KLBQ86Z14 1044 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 BTNL2Q9UIR0 455 aa18.21■□□□□ 0.51
COL27A1-207ENST00000494090 BORCS7-ASMTA0A0B4J1R7 106 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 FBP2O00757 339 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 OSMP13725 252 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 PYCR1P32322 319 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 ZNF81P51508 661 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 NCS1P62166 190 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 HHEXQ03014 270 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 MICAQ29983 383 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.2■□□□□ 0.5
COL27A1-207ENST00000494090 CNTN4Q8IWV2 1026 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 RDH14Q9HBH5 336 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 MAGED1Q9Y5V3 778 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms