RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 KRT87PA6NCN2 255 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 NPIPB15A6NHN6 443 aaPredicted RBP2.74□□□□□ -1.97
PTCD3-218ENST00000493430 TLR4O00206 839 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 EEF2KO00418 725 aaKnown RBP2.74□□□□□ -1.97
PTCD3-218ENST00000493430 MCF2LO15068 1137 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 VILLO15195 856 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 INPP4BO15327 924 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 ZNF217O75362 1048 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 CSO75390 466 aaKnown RBP2.74□□□□□ -1.97
PTCD3-218ENST00000493430 MTX2O75431 263 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 TRMUO75648 421 aaKnown RBP2.74□□□□□ -1.97
PTCD3-218ENST00000493430 MOCS3O95396 460 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 HLA-DQB2P05538 268 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 ATP5BP06576 529 aaKnown RBP2.74□□□□□ -1.97
PTCD3-218ENST00000493430 TPOP07202 933 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 SRPRAP08240 638 aaKnown RBP2.74□□□□□ -1.97
PTCD3-218ENST00000493430 KRT3P12035 628 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 ERCC2P18074 760 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 TRIM21P19474 475 aaKnown RBP2.74□□□□□ -1.97
PTCD3-218ENST00000493430 CASP14P31944 242 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 SSR1P43307 286 aaKnown RBP2.74□□□□□ -1.97
PTCD3-218ENST00000493430 NSFP46459 744 aaKnown RBP2.74□□□□□ -1.97
PTCD3-218ENST00000493430 SLC6A12P48065 614 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 RXRGP48443 463 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 C21orf59P57076 290 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 PPP1CAP62136 330 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 DYNLT1P63172 113 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 ZBED6P86452 979 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 SLC25A11Q02978 314 aaKnown RBP2.74□□□□□ -1.97
PTCD3-218ENST00000493430 GBE1Q04446 702 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 CETN1Q12798 172 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 MAMLD1Q13495 774 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 LY6DQ14210 128 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 WSCD2Q2TBF2 565 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 ZSCAN23Q3MJ62 389 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 SOWAHCQ53LP3 525 aaPredicted RBP2.74□□□□□ -1.97
PTCD3-218ENST00000493430 CARD16Q5EG05 197 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 XKR6Q5GH73 641 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 ATP1A1-AS1Q5TC04 95 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 NKAIN2Q5VXU1 208 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 CDC73Q6P1J9 531 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 CERS6Q6ZMG9 384 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 Q6ZSR6 202 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 ERN2Q76MJ5 926 aaKnown RBP2.74□□□□□ -1.97
PTCD3-218ENST00000493430 HSD11B1LQ7Z5J1 315 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 SLFN11Q7Z7L1 901 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 SDCCAG8Q86SQ7 713 aaPredicted RBP2.74□□□□□ -1.97
PTCD3-218ENST00000493430 HORMAD1Q86X24 394 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 PHF13Q86YI8 300 aaPredicted RBP2.74□□□□□ -1.97
PTCD3-218ENST00000493430 PLD3Q8IV08 490 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 CCDC50Q8IVM0 306 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 FAM114A1Q8IWE2 563 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 RASGEF1CQ8N431 466 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 RTL3Q8N8U3 475 aaKnown RBP2.74□□□□□ -1.97
PTCD3-218ENST00000493430 CCDC89Q8N998 374 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 Q8N9G6 341 aaPredicted RBP2.74□□□□□ -1.97
PTCD3-218ENST00000493430 OR2T12Q8NG77 320 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 OR2AP1Q8NGE2 309 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 LMX1AQ8TE12 382 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 ZNRF4Q8WWF5 429 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 SMPDL3BQ92485 455 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 FAM131CQ96AQ9 280 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 ATXN7L3BQ96GX2 97 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 ERGIC2Q96RQ1 377 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 APOL2Q9BQE5 337 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 NUP85Q9BW27 656 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 PIGMQ9H3S5 423 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 LRRC19Q9H756 370 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 RDH14Q9HBH5 336 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 SGK2Q9HBY8 427 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 NT5MQ9NPB1 228 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 GDF3Q9NR23 364 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 ANO10Q9NW15 660 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 MOSPD1Q9UJG1 213 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 ANAPC7Q9UJX3 599 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 MKLN1Q9UL63 735 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 KIAA1257Q9ULG3 409 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 STAP1Q9ULZ2 295 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 NENFQ9UMX5 172 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 SATB2Q9UPW6 733 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 TMEM98Q9Y2Y6 226 aa2.74□□□□□ -1.97
PTCD3-218ENST00000493430 NINQ8N4C6 2090 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 TENM4Q6N022 2769 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 HCFC1P51610 2035 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 PTPN13Q12923 2485 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 ILVBLA1L0T0 632 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 LRRC72A6NJI9 287 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 SIGLEC16A6NMB1 481 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 A8MU76 341 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 KCNK1O00180 336 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 FLRT2O43155 660 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 KDELR3O43731 214 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 SRSF10O75494 262 aaKnown RBP2.73□□□□□ -1.97
PTCD3-218ENST00000493430 CLDN11O75508 207 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 FGFR1OPO95684 399 aaKnown RBP2.73□□□□□ -1.97
PTCD3-218ENST00000493430 LDOC1O95751 146 aaPredicted RBP2.73□□□□□ -1.97
PTCD3-218ENST00000493430 LSM8O95777 96 aaKnown RBP2.73□□□□□ -1.97
PTCD3-218ENST00000493430 IGSF6O95976 241 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 SOD1P00441 154 aa2.73□□□□□ -1.97
PTCD3-218ENST00000493430 F9P00740 461 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms