RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 TIGD4Q8IY51 512 aa12.96□□□□□ -0.33
TRIM11-204ENST00000493030 STOML3Q8TAV4 291 aa12.96□□□□□ -0.33
TRIM11-204ENST00000493030 CD300LFQ8TDQ1 290 aa12.96□□□□□ -0.33
TRIM11-204ENST00000493030 MMP27Q9H306 513 aa12.96□□□□□ -0.33
TRIM11-204ENST00000493030 CCDC86Q9H6F5 360 aaKnown RBP12.96□□□□□ -0.33
TRIM11-204ENST00000493030 ZNF442Q9H7R0 627 aa12.96□□□□□ -0.33
TRIM11-204ENST00000493030 KCMF1Q9P0J7 381 aa12.96□□□□□ -0.33
TRIM11-204ENST00000493030 M0QZQ0 153 aa12.96□□□□□ -0.33
TRIM11-204ENST00000493030 NPC1O15118 1278 aa12.96□□□□□ -0.33
TRIM11-204ENST00000493030 AMY2BP19961 511 aa12.96□□□□□ -0.33
TRIM11-204ENST00000493030 CLCN2P51788 898 aa12.96□□□□□ -0.33
TRIM11-204ENST00000493030 RPA4Q13156 261 aa12.96□□□□□ -0.33
TRIM11-204ENST00000493030 TCTE1Q5JU00 501 aa12.96□□□□□ -0.33
TRIM11-204ENST00000493030 EEF1A1P5Q5VTE0 462 aa12.96□□□□□ -0.33
TRIM11-204ENST00000493030 FEVQ99581 238 aa12.96□□□□□ -0.33
TRIM11-204ENST00000493030 CLCA1A8K7I4 914 aa12.96□□□□□ -0.34
TRIM11-204ENST00000493030 NOTOA8MTQ0 251 aa12.96□□□□□ -0.34
TRIM11-204ENST00000493030 HPRP00739 348 aa12.96□□□□□ -0.34
TRIM11-204ENST00000493030 RPS3P23396 243 aaKnown RBP eCLIP12.96□□□□□ -0.34
TRIM11-204ENST00000493030 CFL1P23528 166 aaKnown RBP12.96□□□□□ -0.34
TRIM11-204ENST00000493030 GSTM2P28161 218 aa12.96□□□□□ -0.34
TRIM11-204ENST00000493030 SPHARQ15513 63 aa12.96□□□□□ -0.34
TRIM11-204ENST00000493030 ZNF829Q3KNS6 432 aaPredicted RBP12.96□□□□□ -0.34
TRIM11-204ENST00000493030 C17orf99Q6UX52 265 aa12.96□□□□□ -0.34
TRIM11-204ENST00000493030 ZNF440Q8IYI8 595 aa12.96□□□□□ -0.34
TRIM11-204ENST00000493030 HOXB13Q92826 284 aaPredicted RBP12.96□□□□□ -0.34
TRIM11-204ENST00000493030 FIZ1Q96SL8 496 aa12.96□□□□□ -0.34
TRIM11-204ENST00000493030 HDHD5Q9BXW7 423 aa12.96□□□□□ -0.34
TRIM11-204ENST00000493030 KCNN3Q9UGI6 736 aa12.96□□□□□ -0.34
TRIM11-204ENST00000493030 GPR52Q9Y2T5 361 aa12.96□□□□□ -0.34
TRIM11-204ENST00000493030 GNAO1P09471 354 aa12.96□□□□□ -0.34
TRIM11-204ENST00000493030 CD68P34810 354 aaPredicted RBP12.96□□□□□ -0.34
TRIM11-204ENST00000493030 ZNF252P-AS1Q0IIN9 211 aa12.96□□□□□ -0.34
TRIM11-204ENST00000493030 POU4F2Q12837 409 aa12.96□□□□□ -0.34
TRIM11-204ENST00000493030 MOGSQ13724 837 aa12.96□□□□□ -0.34
TRIM11-204ENST00000493030 PLBD1Q6P4A8 553 aa12.96□□□□□ -0.34
TRIM11-204ENST00000493030 NRMQ8IXM6 262 aa12.96□□□□□ -0.34
TRIM11-204ENST00000493030 PHOX2BQ99453 314 aa12.96□□□□□ -0.34
TRIM11-204ENST00000493030 SLC12A9Q9BXP2 914 aa12.96□□□□□ -0.34
TRIM11-204ENST00000493030 LMAN1LQ9HAT1 526 aa12.96□□□□□ -0.34
TRIM11-204ENST00000493030 RDH8Q9NYR8 311 aa12.96□□□□□ -0.34
TRIM11-204ENST00000493030 TMPRSS11EQ9UL52 423 aa12.96□□□□□ -0.34
TRIM11-204ENST00000493030 ICKQ9UPZ9 632 aa12.96□□□□□ -0.34
TRIM11-204ENST00000493030 ISPDA4D126 451 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 PROZP22891 400 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 UGT2B10P36537 528 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 ACTA2P62736 377 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 ACTG2P63267 376 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 MLC1Q15049 377 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 USF2Q15853 346 aaPredicted RBP12.95□□□□□ -0.34
TRIM11-204ENST00000493030 PIGGQ5H8A4 983 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 RPS26P11Q5JNZ5 115 aaPredicted RBP12.95□□□□□ -0.34
TRIM11-204ENST00000493030 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.95□□□□□ -0.34
TRIM11-204ENST00000493030 FTMTQ8N4E7 242 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 ACBD7Q8N6N7 88 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 TMEM68Q96MH6 324 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 IL26Q9NPH9 171 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 PAK1IP1Q9NWT1 392 aaPredicted RBP12.95□□□□□ -0.34
TRIM11-204ENST00000493030 CERS1P27544 350 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 ZNF81P51508 661 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 UBE2NP61088 152 aaKnown RBP12.95□□□□□ -0.34
TRIM11-204ENST00000493030 DEFB133Q30KQ1 61 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 PM20D1Q6GTS8 502 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 SHFQ7M4L6 423 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 LIX1LQ8IVB5 337 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 ADAMTS18Q8TE60 1221 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 CWH43Q9H720 699 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 MKS1Q9NXB0 559 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 SMCO3A2RU48 225 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 GGT3PA6NGU5 568 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 A8MVJ9 347 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 OXSR1O95747 527 aaPredicted RBP12.95□□□□□ -0.34
TRIM11-204ENST00000493030 AFF1P51825 1210 aaKnown RBP12.95□□□□□ -0.34
TRIM11-204ENST00000493030 APOFQ13790 326 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 RCAN2Q14206 197 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 MAMDC2Q7Z304 686 aaPredicted RBP12.95□□□□□ -0.34
TRIM11-204ENST00000493030 SCD5Q86SK9 330 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 TMEM151BQ8IW70 566 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 Q8N402 240 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 SPRYD4Q8WW59 207 aaPredicted RBP12.95□□□□□ -0.34
TRIM11-204ENST00000493030 TMEM185BQ9H7F4 350 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 MYH2Q9UKX2 1941 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 H7C417 338 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 KIAA0513O60268 411 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 FMO6PO60774 539 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 ZNF789Q5FWF6 425 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 MRPL10Q7Z7H8 261 aaKnown RBP12.95□□□□□ -0.34
TRIM11-204ENST00000493030 TCEAL8Q8IYN2 117 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 IL17RCQ8NAC3 791 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 NELL2Q99435 816 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 ACTRT3Q9BYD9 372 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 FAM118AQ9NWS6 357 aa12.95□□□□□ -0.34
TRIM11-204ENST00000493030 MRPL15Q9P015 296 aaKnown RBP12.95□□□□□ -0.34
TRIM11-204ENST00000493030 ACOT7O00154 380 aa12.94□□□□□ -0.34
TRIM11-204ENST00000493030 SMAD6O43541 496 aaKnown RBP12.94□□□□□ -0.34
TRIM11-204ENST00000493030 PRAMEF2O60811 474 aa12.94□□□□□ -0.34
TRIM11-204ENST00000493030 GKN3PP0CG01 181 aa12.94□□□□□ -0.34
TRIM11-204ENST00000493030 CEBPBP17676 345 aa12.94□□□□□ -0.34
TRIM11-204ENST00000493030 CLDN2P57739 230 aa12.94□□□□□ -0.34
TRIM11-204ENST00000493030 ZNF45Q02386 682 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms