RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 ALOX5P09917 674 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 ITGAMP11215 1152 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 POU1F1P28069 291 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 RYKP34925 604 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 SSR2P43308 183 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 GP2P55259 537 aaKnown RBP6.61□□□□□ -1.35
HERC4-211ENST00000492996 CLCA4Q14CN2 919 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 UAP1L1Q3KQV9 507 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 ZC3H12BQ5HYM0 836 aaKnown RBP6.61□□□□□ -1.35
HERC4-211ENST00000492996 GTF2IRD2BQ6EKJ0 949 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 Q6ZS52 159 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 GTF2IRD2Q86UP8 949 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 PGBD3Q8N328 593 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 HORMAD2Q8N7B1 307 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 ASCC1Q8N9N2 400 aaKnown RBP6.61□□□□□ -1.35
HERC4-211ENST00000492996 ACBD4Q8NC06 268 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 OR10G2Q8NGC3 310 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 GPBAR1Q8TDU6 330 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 HTRA1Q92743 480 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 RORBQ92753 470 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 CXorf40BQ96DE9 158 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 NXPE2Q96DL1 559 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 NIPSNAP1Q9BPW8 284 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 YIPF4Q9BSR8 244 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 MS4A8Q9BY19 250 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 RAD21L1Q9H4I0 556 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 PHPT1Q9NRX4 125 aaPredicted RBP6.61□□□□□ -1.35
HERC4-211ENST00000492996 SCN3BQ9NY72 215 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 ANKMY1Q9P2S6 941 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 R4GN57 208 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 A0A1W2PPV9 198 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 B8ZZF3 427 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 MEN1O00255 615 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 NDUFS2O75306 463 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 JRKO75564 520 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 KLF8O95600 359 aaPredicted RBP6.61□□□□□ -1.35
HERC4-211ENST00000492996 RPN2P04844 631 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 BSGP35613 385 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 CLDN2P57739 230 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 RPA4Q13156 261 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 TOP3AQ13472 1001 aaPredicted RBP6.61□□□□□ -1.35
HERC4-211ENST00000492996 AQP6Q13520 282 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 SPCS2Q15005 226 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 MAD2L1BPQ15013 274 aaPredicted RBP6.61□□□□□ -1.35
HERC4-211ENST00000492996 TMEM236Q5W0B7 351 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 LSRQ86X29 649 aaPredicted RBP6.61□□□□□ -1.35
HERC4-211ENST00000492996 P3H2Q8IVL5 708 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 VANGL1Q8TAA9 524 aaPredicted RBP6.61□□□□□ -1.35
HERC4-211ENST00000492996 TRUB1Q8WWH5 349 aaKnown RBP6.61□□□□□ -1.35
HERC4-211ENST00000492996 TANKQ92844 425 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 TRIM63Q969Q1 353 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 CAMK1GQ96NX5 476 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 ZNF300Q96RE9 604 aaPredicted RBP6.61□□□□□ -1.35
HERC4-211ENST00000492996 DDA1Q9BW61 102 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.61□□□□□ -1.35
HERC4-211ENST00000492996 KLHL31Q9H511 634 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 TRPC4Q9UBN4 977 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 TMCC3Q9ULS5 477 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 TPRKBQ9Y3C4 175 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 PCDHGA10Q9Y5H3 936 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 ZNF99A8MXY4 864 aaPredicted RBP6.61□□□□□ -1.35
HERC4-211ENST00000492996 PRAMEF26H0Y7S4 382 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 ZNF701M0R085 212 aaPredicted RBP6.61□□□□□ -1.35
HERC4-211ENST00000492996 CAPN5O15484 640 aaPredicted RBP6.61□□□□□ -1.35
HERC4-211ENST00000492996 PDPK1O15530 556 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 NDUFS4O43181 175 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 BCAS1O75363 584 aaPredicted RBP6.61□□□□□ -1.35
HERC4-211ENST00000492996 LCKP06239 509 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 C8orf89P0DMQ9 161 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 JUNBP17275 347 aaPredicted RBP6.61□□□□□ -1.35
HERC4-211ENST00000492996 POLR2CP19387 275 aaPredicted RBP6.61□□□□□ -1.35
HERC4-211ENST00000492996 DDCP20711 480 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 BCKDHBP21953 392 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 GPC1P35052 558 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 RPL3P39023 403 aaKnown RBP6.61□□□□□ -1.35
HERC4-211ENST00000492996 MASP1P48740 699 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 DUSP3P51452 185 aaPredicted RBP6.61□□□□□ -1.35
HERC4-211ENST00000492996 MLLT10P55197 1068 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 CSNK1G2P78368 415 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 ZNF750Q32MQ0 723 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 TAGAPQ8N103 731 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 GOT1L1Q8NHS2 421 aaPredicted RBP6.61□□□□□ -1.35
HERC4-211ENST00000492996 FAR1Q8WVX9 515 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 XAGE5Q8WWM1 108 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 DOK1Q99704 481 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 TUBA1CQ9BQE3 449 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 SLC17A9Q9BYT1 436 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 GABARAPL1Q9H0R8 117 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 CD93Q9NPY3 652 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 LHX9Q9NQ69 397 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 WASH6PQ9NQA3 447 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 POLE4Q9NR33 117 aa6.61□□□□□ -1.35
HERC4-211ENST00000492996 NDRG4Q9ULP0 352 aaKnown RBP6.61□□□□□ -1.35
HERC4-211ENST00000492996 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.61□□□□□ -1.352e-12■■■■□ 19.7
HERC4-211ENST00000492996 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.61□□□□□ -1.35
HERC4-211ENST00000492996 ARHGEF17Q96PE2 2063 aaPredicted RBP6.61□□□□□ -1.35
HERC4-211ENST00000492996 MDC1Q14676 2089 aaKnown RBP6.6□□□□□ -1.35
HERC4-211ENST00000492996 IGKV1-8A0A0C4DH67 115 aa6.6□□□□□ -1.35
HERC4-211ENST00000492996 ATP6V1G2-DDX39BF2Z307 99 aa6.6□□□□□ -1.35
HERC4-211ENST00000492996 H0Y8X5 98 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms