RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 THUMPD3Q9BV44 507 aaKnown RBP8.84□□□□□ -0.99
BRCA1-219ENST00000491747 CD244Q9BZW8 370 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 CCDC90BQ9GZT6 254 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 ACTR8Q9H981 624 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 PELI2Q9HAT8 420 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 ZNF304Q9HCX3 659 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 AKIP1Q9NQ31 210 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 NECTIN3Q9NQS3 549 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 NUDT4Q9NZJ9 180 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 CTSFQ9UBX1 484 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 AP3M1Q9Y2T2 418 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 PCDHGB1Q9Y5G3 927 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 KCNE2Q9Y6J6 123 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 SCN2AQ99250 2005 aa8.84□□□□□ -0.99
BRCA1-219ENST00000491747 A0A0A6YYC8 382 aaPredicted RBP8.83□□□□□ -1
BRCA1-219ENST00000491747 HTR3EA5X5Y0 456 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 TMEM247A6NEH6 219 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 C9J4A7 227 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 PTGES3LE9PB15 166 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 I3L1I5 382 aaPredicted RBP8.83□□□□□ -1
BRCA1-219ENST00000491747 HS6ST1O60243 411 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 STK16O75716 305 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 RECKO95980 971 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 PRB1P04280 392 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 FAM87AP0C7U9 286 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 C1GALT1C1LP0DN25 315 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 CD22P20273 847 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 NR4A1P22736 598 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 RYKP34925 604 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 IST1P53990 364 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 ISL1P61371 349 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 MC1RQ01726 317 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 NKG7Q16617 165 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 DGUOKQ16854 277 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 SYT16Q17RD7 645 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 DPY19L1Q2PZI1 675 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 CTU2Q2VPK5 515 aaKnown RBP8.83□□□□□ -1
BRCA1-219ENST00000491747 ZNF691Q5VV52 312 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 SHISA6Q6ZSJ9 500 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 ASPGQ86U10 573 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 AMER3Q8N944 861 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 OR52B6Q8NGF0 335 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 SLC13A3Q8WWT9 602 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 RORBQ92753 470 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 ZNF566Q969W8 418 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 FAM162AQ96A26 154 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 MESP1Q9BRJ9 268 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 AICDAQ9GZX7 198 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 DNAJC11Q9NVH1 559 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 VAPAQ9P0L0 249 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 GPN3Q9UHW5 284 aaPredicted RBP8.83□□□□□ -1
BRCA1-219ENST00000491747 PTRH2Q9Y3E5 179 aaKnown RBP8.83□□□□□ -1
BRCA1-219ENST00000491747 FAM32AQ9Y421 112 aaKnown RBP8.83□□□□□ -1
BRCA1-219ENST00000491747 TNPO3Q9Y5L0 923 aaKnown RBP8.83□□□□□ -1
BRCA1-219ENST00000491747 GPC6Q9Y625 555 aaPredicted RBP8.83□□□□□ -1
BRCA1-219ENST00000491747 KCNMB2Q9Y691 235 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 MED13Q9UHV7 2174 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 TNRC6AQ8NDV7 1962 aaKnown RBP8.83□□□□□ -1
BRCA1-219ENST00000491747 ELOVL7A1L3X0 281 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 LSM1O15116 133 aaKnown RBP8.83□□□□□ -1
BRCA1-219ENST00000491747 DNAJB6O75190 326 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 INMTO95050 263 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 SCELO95171 688 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 B3GALT4O96024 378 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 PCMT1P22061 227 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 DGKQP52824 942 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 GP2P55259 537 aaKnown RBP8.83□□□□□ -1
BRCA1-219ENST00000491747 HYAL2Q12891 473 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 AP5B1Q2VPB7 878 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 CCDC92Q53HC0 331 aaPredicted RBP8.83□□□□□ -1
BRCA1-219ENST00000491747 GARNL3Q5VVW2 1013 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 ADNP2Q6IQ32 1131 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 LETMD1Q6P1Q0 360 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 ENPP6Q6UWR7 440 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 PIWIL3Q7Z3Z3 882 aaKnown RBP8.83□□□□□ -1
BRCA1-219ENST00000491747 BTLAQ7Z6A9 289 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 FAM86B1Q8N7N1 296 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 SETD9Q8NE22 299 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 OR9A4Q8NGU2 314 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 OR10A6Q8NH74 314 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 OR5K1Q8NHB7 308 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 ZCCHC10Q8TBK6 192 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 COL26A1Q96A83 441 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 PPP3R2Q96LZ3 170 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 CDK15Q96Q40 435 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 SPSB2Q99619 263 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 PSD2Q9BQI7 771 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 SLC26A1Q9H2B4 701 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 MAGIXQ9H6Y5 334 aa8.83□□□□□ -1
BRCA1-219ENST00000491747 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.83□□□□□ -1
BRCA1-219ENST00000491747 ZNF490Q9ULM2 529 aaPredicted RBP8.83□□□□□ -1
BRCA1-219ENST00000491747 POLR3HQ9Y535 204 aaPredicted RBP8.83□□□□□ -1
BRCA1-219ENST00000491747 VSTM2BA6NLU5 285 aa8.82□□□□□ -1
BRCA1-219ENST00000491747 C4orf51C9J302 202 aa8.82□□□□□ -1
BRCA1-219ENST00000491747 M0QX08 132 aa8.82□□□□□ -1
BRCA1-219ENST00000491747 MASP2O00187 686 aa8.82□□□□□ -1
BRCA1-219ENST00000491747 ANKRD28O15084 1053 aa8.82□□□□□ -1
BRCA1-219ENST00000491747 SLC16A6O15403 523 aa8.82□□□□□ -1
BRCA1-219ENST00000491747 S100BP04271 92 aaPredicted RBP8.82□□□□□ -1
BRCA1-219ENST00000491747 FUT4P22083 530 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms