RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 ALPK2Q86TB3 2170 aa11.97□□□□□ -0.49
USF1-206ENST00000491629 LRRC14BA6NHZ5 514 aa11.97□□□□□ -0.49
USF1-206ENST00000491629 K7EPI3 171 aa11.97□□□□□ -0.49
USF1-206ENST00000491629 UBXN8O00124 270 aa11.97□□□□□ -0.49
USF1-206ENST00000491629 MSTNO14793 375 aa11.97□□□□□ -0.49
USF1-206ENST00000491629 UGT2B11O75310 529 aa11.97□□□□□ -0.49
USF1-206ENST00000491629 MTHFD2P13995 350 aa11.97□□□□□ -0.49
USF1-206ENST00000491629 CNTFP26441 200 aa11.97□□□□□ -0.49
USF1-206ENST00000491629 SERPINB1P30740 379 aa11.97□□□□□ -0.49
USF1-206ENST00000491629 CD79BP40259 229 aa11.97□□□□□ -0.49
USF1-206ENST00000491629 PCYT1AP49585 367 aa11.97□□□□□ -0.49
USF1-206ENST00000491629 TMED10P49755 219 aaKnown RBP11.97□□□□□ -0.49
USF1-206ENST00000491629 ARFIP1P53367 373 aa11.97□□□□□ -0.49
USF1-206ENST00000491629 CLDN15P56746 228 aa11.97□□□□□ -0.49
USF1-206ENST00000491629 ATP6V0D1P61421 351 aa11.97□□□□□ -0.49
USF1-206ENST00000491629 DUSP2Q05923 314 aa11.97□□□□□ -0.49
USF1-206ENST00000491629 PDIA2Q13087 525 aaKnown RBP11.97□□□□□ -0.49
USF1-206ENST00000491629 HLA-DQA1Q5Y7H0 255 aa11.97□□□□□ -0.49
USF1-206ENST00000491629 FAM111BQ6SJ93 734 aa11.97□□□□□ -0.49
USF1-206ENST00000491629 ZNF550Q7Z398 422 aa11.97□□□□□ -0.49
USF1-206ENST00000491629 BTLAQ7Z6A9 289 aa11.97□□□□□ -0.49
USF1-206ENST00000491629 GALNT12Q8IXK2 581 aa11.97□□□□□ -0.49
USF1-206ENST00000491629 C17orf47Q8NEP4 570 aa11.97□□□□□ -0.49
USF1-206ENST00000491629 ANP32BQ92688 251 aaKnown RBP11.97□□□□□ -0.49
USF1-206ENST00000491629 GPR22Q99680 433 aa11.97□□□□□ -0.49
USF1-206ENST00000491629 OSBPL11Q9BXB4 747 aa11.97□□□□□ -0.49
USF1-206ENST00000491629 OPN3Q9H1Y3 402 aaPredicted RBP11.97□□□□□ -0.49
USF1-206ENST00000491629 ALG9Q9H6U8 611 aa11.97□□□□□ -0.49
USF1-206ENST00000491629 LYARQ9NX58 379 aaKnown RBP11.97□□□□□ -0.49
USF1-206ENST00000491629 FBXL2Q9UKC9 423 aa11.97□□□□□ -0.49
USF1-206ENST00000491629 ANK2Q01484 3957 aa11.97□□□□□ -0.49
USF1-206ENST00000491629 CES2O00748 559 aa11.96□□□□□ -0.49
USF1-206ENST00000491629 SEC31AO94979 1220 aaKnown RBP11.96□□□□□ -0.49
USF1-206ENST00000491629 SOX30O94993 753 aa11.96□□□□□ -0.49
USF1-206ENST00000491629 CGAP01215 116 aa11.96□□□□□ -0.49
USF1-206ENST00000491629 PAX1P15863 534 aa11.96□□□□□ -0.49
USF1-206ENST00000491629 ZNF708P17019 499 aa11.96□□□□□ -0.49
USF1-206ENST00000491629 FPR1P21462 350 aa11.96□□□□□ -0.49
USF1-206ENST00000491629 KIR2DL2P43627 348 aaPredicted RBP11.96□□□□□ -0.49
USF1-206ENST00000491629 DIO3P55073 304 aa11.96□□□□□ -0.49
USF1-206ENST00000491629 ARL4CP56559 192 aa11.96□□□□□ -0.49
USF1-206ENST00000491629 NRG3P56975 720 aa11.96□□□□□ -0.49
USF1-206ENST00000491629 B3GALT5-AS1P59052 145 aa11.96□□□□□ -0.49
USF1-206ENST00000491629 GAB1Q13480 694 aa11.96□□□□□ -0.49
USF1-206ENST00000491629 EXOSC7Q15024 291 aaKnown RBP11.96□□□□□ -0.49
USF1-206ENST00000491629 SLC30A6Q6NXT4 461 aa11.96□□□□□ -0.49
USF1-206ENST00000491629 NUP54Q7Z3B4 507 aa11.96□□□□□ -0.49
USF1-206ENST00000491629 LRRC8AQ8IWT6 810 aa11.96□□□□□ -0.49
USF1-206ENST00000491629 PHC2Q8IXK0 858 aa11.96□□□□□ -0.49
USF1-206ENST00000491629 OR14L1PQ8NHC6 308 aa11.96□□□□□ -0.49
USF1-206ENST00000491629 OMA1Q96E52 524 aa11.96□□□□□ -0.49
USF1-206ENST00000491629 RBBP8Q99708 897 aa11.96□□□□□ -0.49
USF1-206ENST00000491629 ITPAQ9BY32 194 aa11.96□□□□□ -0.49
USF1-206ENST00000491629 NUDT4Q9NZJ9 180 aa11.96□□□□□ -0.49
USF1-206ENST00000491629 OPTCQ9UBM4 332 aa11.96□□□□□ -0.49
USF1-206ENST00000491629 ADGRE2Q9UHX3 823 aa11.96□□□□□ -0.49
USF1-206ENST00000491629 ZNF639Q9UID6 485 aa11.96□□□□□ -0.49
USF1-206ENST00000491629 H0YIV9 168 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 ZIC3O60481 467 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 CBR3O75828 277 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 SMNDC1O75940 238 aaKnown RBP eCLIP11.95□□□□□ -0.5
USF1-206ENST00000491629 THBDP07204 575 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 RHOXF2BP0C7M4 288 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 CPMP14384 443 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 NAGAP17050 411 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 PTX3P26022 381 aaPredicted RBP11.95□□□□□ -0.5
USF1-206ENST00000491629 PIK3R1P27986 724 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 SSTR1P30872 391 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 UGT2B10P36537 528 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 PIK3CGP48736 1102 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 XKP51811 444 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 NEK2P51955 445 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 SLC12A2P55011 1212 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 NR1H2P55055 460 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 RPP38P78345 283 aaKnown RBP11.95□□□□□ -0.5
USF1-206ENST00000491629 PRICKLE4Q2TBC4 344 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 OR52E8Q6IFG1 317 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 CYP20A1Q6UW02 462 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 ENPP6Q6UWR7 440 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 C20orf204Q6ZNR8 217 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 CMC1Q7Z7K0 106 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 IFNEQ86WN2 208 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 GRAMD2AQ8IUY3 354 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 SLC35F6Q8N357 371 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 TEX9Q8N6V9 391 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 MAPK1IP1LQ8NDC0 245 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 OR7G1Q8NGA0 311 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 WDR20Q8TBZ3 569 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 PGM2Q96G03 612 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 MED18Q9BUE0 208 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 ACBD3Q9H3P7 528 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 ACTR8Q9H981 624 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 NSMCE4AQ9NXX6 385 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 TAS2R10Q9NYW0 307 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 MAT2BQ9NZL9 334 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 CES1P1Q9UKY3 287 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 DLGAP4Q9Y2H0 992 aa11.95□□□□□ -0.5
USF1-206ENST00000491629 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.95□□□□□ -0.53e-7■■□□□ 13.2
USF1-206ENST00000491629 GOLGA6L10A0A0M3HER8 536 aa11.94□□□□□ -0.5
USF1-206ENST00000491629 PRAMEF25A6NGN4 478 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms